Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Rhodopseudomonas boonkerdii strain:NS23

ABSTRACT: Rhodopseudomonas boonkerdii strain:NS23 Genome sequencing and assembly

PROVIDER: PRJNA524969 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR8649080_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Anaerobic degradation of syringic acid by an adapted strain of Rhodopseudomonas palustris

Project description:Rhodopseudomonas palustris strain SA008.1.07 can use syringic acid as sole organic carbon source anaerobically. Grew all anaerobically in various carbon sources: syringic acid, succinate, and p-hydroxybenzoic acid.

2019-11-25 | GSE135630 | GEO

Gene expression patterns of a Rhodopseudomonas palustris ΔregSR strain under photoheterotrophic growth conditions

Project description:The redox-sensing two-component signal transduction system, RegSR, in Rhodopseudomonas palustris has been shown to regulate an uptake hydrogenase in response to varying cellular redox states; however, its role is still largely undefined. Here, we used RNA sequencing to compare gene expression patterns in wild type R. palustris strain CGA010 to a ΔregSR derivative, CGA2023, under varying metabolic conditions. Growth conditions were chosen to utilize the different metabolic capabilites of R. palustris and, thus, present a variety of different redox challenges to the cell.

2021-07-31 | GSE150608 | GEO

Functional genomic analysis of three nitrogenase isozymes in the photosynthetic bacterium Rhodopseudomonas palustris

Project description:To address the question of how photosynthetic bacterium Rhodopseudomonas palustris differentially regulates gene expression of three nitrogenase isozymes (Mo, V, and Fe nitrogenases), we constructed Mo strain (Mo nitrogenase only strain), V strain (V nitrogenase only strain), and Fe strain (Fe nitrogenase only strain), and analyzed the whole genome transcriptome profiles of each mutant and wild-type cells grown under nitrogen-fixing conditions. Keywords: Genetic modification

2005-11-10 | GSE3030 | GEO

Rhodopseudomonas palustris strain:P1

Project description:Rhodopseudomonas palustris strain:P1 Genome sequencing and assembly

| PRJNA890876 | ENA

Rhodopseudomonas palustris strain:XCP

Project description:Rhodopseudomonas palustris strain:XCP Genome sequencing and assembly

| PRJNA475372 | ENA

Rhodopseudomonas palustris strain:42OL

Project description:Rhodopseudomonas palustris strain:42OL Genome sequencing and assembly

| PRJNA283573 | ENA

Rhodopseudomonas palustris strain:2.1.18

Project description:Rhodopseudomonas palustris strain:2.1.18 Genome sequencing and assembly

| PRJNA491194 | ENA

Rhodopseudomonas palustris strain:2.1.37

Project description:Rhodopseudomonas palustris strain:2.1.37 Genome sequencing and assembly

| PRJNA491196 | ENA

Rhodopseudomonas palustris strain:R1

Project description:Rhodopseudomonas palustris strain:R1 Genome sequencing and assembly

| PRJNA488489 | ENA

Rhodopseudomonas palustris strain:AZUL

Project description:Rhodopseudomonas palustris strain:AZUL Genome sequencing and assembly

| PRJNA857705 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data