Project description:Microbial communities in the rhizosphere make significant contributions to crop health and nutrient cycling. However, their ability to perform important biogeochemical processes remains uncharacterized. Important functional genes, which characterize the rhizosphere microbial community, were identified to understand metabolic capabilities in the maize rhizosphere using GeoChip 3.0-based functional gene array method.

2014-09-12 | GSE61338 | GEO

peanut rhizosphere microbial community

Project description:peanut rhizosphere microbial community Genome sequencing

| PRJNA592826 | ENA

peanut rhizosphere microbial community

Project description:peanut rhizosphere microbial community Genome sequencing

| PRJNA575117 | ENA

soybean roots and rhizosphere soil bacteria 16s

Project description:soybean roots and rhizosphere soil bacteria 16s Raw sequence reads

| PRJNA448356 | ENA

peanut rhizosphere bacterial community

Project description:peanut rhizosphere bacterial community Raw sequence reads

| PRJNA636587 | ENA

Bacterial metagenomic raw datas of peanut rhizosphere soil

Project description:Bacterial metagenomic raw datas of peanut rhizosphere soil Metagenome

| PRJNA773647 | ENA

Vitis vinifera rhizosphere characterization: a metaproteome approach

Project description:Rhizosphere is a complex system of interactions between plant roots, bacteria, fungi and animals, where the release of plant root exudates stimulates bacterial density and diversity. However, the majority of the bacteria in soil results to be unculturable but active. The aim of the present work was to characterize the microbial community associated to the root of V. vinifera cv. Pinot Noir not only under a taxonomic perspective, but also under a functional point of view, using a metaproteome approach. Our results underlined the difference between the metagenomic and metaproteomic approach and the large potentiality of proteomics in describing the environmental bacterial community and its activity. In fact, by this approach, that allows to investigate the mechanisms occurring in the rhizosphere, we showed that bacteria belonging to Streptomyces, Bacillus and Pseudomonas genera are the most active in protein expression. In the rhizosphere, the identified genera were involved mainly in phosphorus and nitrogen soil metabolism.

2022-02-28 | PXD007670 | Pride

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