Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cupriavidus necator H16 strain:DSM 428 | isolate:DSM 428

ABSTRACT: Cupriavidus necator H16 strain:DSM 428 | isolate:DSM 428 Genome sequencing

PROVIDER: PRJNA531660 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR9006995_1.fastq.gz	Fastqsanger.gz
	SRR9006995_2.fastq.gz	Fastqsanger.gz
	SRR9006996_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Cupriavidus necator H16

Project description:Cupriavidus necator H16 Raw sequence reads

| PRJNA802999 | ENA

Cupriavidus necator H16

Project description:Cupriavidus necator H16 Genome sequencing and assembly

| PRJNA1086218 | ENA

Cupriavidus necator H16

Project description:Genome sequencing results of Cupriavidus necator H16 mutant.

| PRJNA1162438 | ENA

Replacing the Calvin cycle with the reductive glycine pathway in Cupriavidus necator

Project description:These data belong to a metabolic engineering project that introduces the reductive glycine pathway for formate assimilation in Cupriavidus necator. As part of this project we performed short-term evolution of the bacterium Cupriavidus necator H16 to grow on glycine as sole carbon and energy source. Some mutations in a putiative glycine transporting systems facilitated growth, and we performed transcriptomics on the evolved strain growing on glycine. Analysis of these transcriptomic data lead us to the discovery of a glycine oxidase (DadA6), which we experimentally demonstrated to play a key role in the glycine assimilation pathay in C. necator.

2020-06-06 | GSE151887 | GEO

Complete Genome Sequence of Cupriavidus necator H16 (DSM 428).

Project description:The hydrogen-utilizing strain Cupriavidus necator H16 (DSM 428) was sequenced using a combination of PacBio and Illumina sequencing. Annotation of this strain reveals 6,543 protein-coding genes, 263 pseudogenes, 64 tRNA genes, and 15 rRNA genes.

| S-EPMC6742796 | biostudies-literature

Cupriavidus necator

Project description:Cupriavidus necator overview

| PRJNA41779 | ENA

Cupriavidus necator H16

Project description:Ralstonia eutropha H16

| PRJNA158697 | ENA

Cupriavidus necator

Project description:Cupriavidus necator Genome sequencing

| PRJNA720661 | ENA

Comparative RNA-Seq of Cupriavidus necator H16, formerly Ralstonia eutropha H16, grown in minimal media with 3-hydroxypropionic acid (3-HP) or fructose as sole carbon source.

Project description:3-hydroxypropionic acid (3-HP) is a promising platform chemical with various industrial applications. Several metabolic routes to produce 3-HP from organic substrates such as sugars or glycerol have been implemented in yeast, enterobacterial species and other microorganisms. In this work, we investigated 3-HP metabolism of the well-studied ‘Knallgas bacterium’ Cupriavidus necator, a potential C1-chassis for the production of 3-HP and other fatty acid derivatives from CO2 and H2. When testing C. necator for its tolerance towards 3-HP, it was noted that it could utilise the compound as the sole source of carbon and energy.

2019-03-31 | E-MTAB-7701 | biostudies-arrayexpress

Cupriavidus necator H16

Project description:RNA-seq analysis of Ralstonia eutropha H16

| PRJNA181195 | ENA