Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: G. hirsutum race marie-galante 85 (MAR85), G. hirsutum race latifolium 40 (LAT40) and G. hirsutum cv. CRI12

PROVIDER: PRJNA531727 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10518003_1.fastq.gz	Fastqsanger.gz
	SRR10518003_2.fastq.gz	Fastqsanger.gz
	SRR10518004_1.fastq.gz	Fastqsanger.gz
	SRR10518004_2.fastq.gz	Fastqsanger.gz
	SRR10518005_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 95

Similar Datasets

Gossypium hirsutum

Project description:G. hirsutum race marie-galante 85 (MAR85), G. hirsutum race latifolium 40 (LAT40) and G. hirsutum cv. CRI12 Raw sequence reads

| PRJNA531551 | ENA

Gossypium hirsutum subsp. latifolium

Project description:Gossypium hirsutum subsp. latifolium Assembly

| PRJNA1173849 | ENA

Phytophthora sojae, races 1, 2,5 and 7 on soybean at 48h

Project description:Examination of soybean hypocotyls cv Harosoy (Rps7) 48h after inoculation with P.sojae from race 1, race 2, race 5 and race 7 Keywords: other

2005-01-01 | GSE1475 | GEO

Gossypium hirsutum subsp. latifolium

Project description:Gossypium hirsutum subsp. latifolium Raw sequence reads

| PRJNA1173776 | ENA

Comparative transcriptome profiles of cotton (G. hirsutum L. cv. Bikaneri narma) during boll development stages under bollworm infested biotic stress

Project description:Comparative transcriptome profiles of cotton (G. hirsutum L. cv. Bikaneri narma) during boll development stages (0, 2, 5 and 10 dpa) under bollworm infested biotic stress. Cotton is one of the most commercially important fibre crops in the world and used as a source for natural textile fibre and cottonseed oil. The biotic stress is one of the major constraints for crop production. Cotton bollworm (Helicoverpa armigera) is one the major insect pest in cotton and drastically damages the cotton boll. To decipher the molecular mechanisms involved in cotton boll/fibre cell development, transcriptome analysis has been carried out by comparing G. hirsutum L cv. Bikaneri narma cotton boll samples induced by biotic stress (bollworm infested) and that their respective control cotton bolls collected under field conditions. Cotton bolls were collected at fibre initiation (0, 2 dpa/days post anthesis) and elongation (5, 10 dpa) stages for both control and biotic stress condition and gene expression profiles were analyzed by Affymetrix cotton GeneChip Genome array.

2015-03-01 | GSE55511 | GEO

Brief exposure to heat differentially affects development of male gametophytes in cotton (Gossypium hirsutum)

Project description:The development of viable gametes is especially susceptible to heat in all higher plants, including cotton (Gossypium hirsutum cv. Sicot 71), resulting in substantial reduction in lint quantity and quality at temperatures above 32 °C. Male reproductive cells are especially vulnerable to heat. This study demonstrates a relatively small impact of heat on leaves compared with a profound impact during early and late male gametophyte development. To investigate the mechanisms leading to heat sensitivity, the proteome of pollen was analyzed after two distinct phases of development (tetrads or binucleate microspores) had been exposed for 5 d to 36/25 °C (day/night) or 40/30 °C. The resulting mature pollen grains were collected for quantitative label-free shotgun proteomic analysis. A total of 868 proteins was quantified. Interestingly, Hsp70s were highly induced in response to extreme heat indicating key roles of this family to cope with heat stress.

2020-10-19 | PXD015721 | Pride

SAGE of cotton fibers and ovules.

Project description:Transcriptomes fiber and ovules were compared by applying serial analysis of gene expression (SAGE). Keywords: Tissue Comparison We constructed three SAGE libraries and sequenced 57321, 64188, and 69104 tags from fiber, Xu-142 ovule (ovule) and fl mutant ovules (fl) respectively of Upland Cotton, Gossypium hirsutum L. cv. Xu-142.

2007-02-17 | E-GEOD-6103 | biostudies-arrayexpress

Dataset of banana transcriptome in response to endophyte bacteria inoculation prior to Fusarium oxysporum f.sp. cubense tropical race 4 (Foc TR4) infection

Project description:We report the first data of RNA sequencing of banana Musa acuminata cv. Pisang ambon kuning (AAA group) inoculated by two different endophyte bacteria named Stenothropomonas nitritireducens (BR-49) and Kocuria rhizophila (SL-08), respectively, prior to Fusarium oxysprorum f.sp. cubense tropical race 4 (Foc TR4).

2020-01-04 | GSE143006 | GEO

Puccinia graminis strain:Race 40-3

Project description:Genome Sequencing of Race 40-3 of Puccinia graminis

| PRJNA277558 | ENA

Puccinia graminis strain:Race 40-A

Project description:Genome Sequencing of Race 40-A of Puccinia graminis

| PRJNA277557 | ENA