Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: The studies of bacterioplankton of Wujiang baisn

PROVIDER: PRJNA532493 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8885947_1.fastq.gz	Fastqsanger.gz
	SRR8885947_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:The studies of bacterioplankton of Wujiang

| PRJNA532690 | ENA

Project description:The studies of bacterioplankton of Wujiang basin

| PRJNA532507 | ENA

Project description:The studies of bacterioplankton of Wujiang trunk stream

| PRJNA532684 | ENA

Project description:The studies of bacterioplankton of Wujiang trunk stream in July

| PRJNA532689 | ENA

Project description:The study of bacterioplankton of Wujiang basin

| PRJNA532656 | ENA

Project description:WUJIANG

| PRJNA449177 | ENA

Project description:WUJIANG HFH_Ar

| PRJNA454677 | ENA

Project description:wujiang bacteria Jan

| PRJNA492150 | ENA

Microarray-based Analysis of Polyamine Transport and Metabolism in the Model Marine Bacterium Silicibacter pomeroyi

Project description:Polyamines, such as putrescine and spermidine, are aliphatic organic compounds with multiple amino groups. They are found ubiquitously in marine systems. However, compared with the extensive studies on the concentration and fate of other dissolved organic nitrogen compounds in seawater, such as dissolved free amino acids (DFAA), investigations of bacterially-mediated polyamine transformations have been rare. Bioinformatic analysis identified genes encoding polyamine transporters in 74 of 109 marine bacterial genomes surveyed, a surprising frequency for a class of organic nitrogen compounds not generally recognized as an important source of carbon and nitrogen for marine bacterioplankton. The genome sequence of marine model bacterium Silicibacter pomeroyi DSS-3 contains a number of genes putatively involved in polyamine use, including six four-gene ATP-binding cassette transport systems. In the present study, polyamine uptake and metabolism by S. pomeroyi was examined to confirm the role of putative polyamine-related genes, and to investigate how well current gene annotations reflect function. A comparative whole-genome microarray approach (Bürgmann et al., 2007) allowed us to identify key genes for transport and metabolism of spermidine in this bacterium, and specify candidate genes for in situ monitoring of polyamine transformations in marine bacterioplankton communities.

2008-12-31 | GSE13781 | GEO

seawater metagenome

Project description:Studies of bacterioplankton community in intensive shrimp aquaculture systems

| PRJDB6777 | ENA