Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Epichloe typhina subsp. clarkii strain:1605_22

ABSTRACT: Epichloe clarkii Hl Genome sequencing and assembly

PROVIDER: PRJNA533212 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR13685313_1.fastq.gz	Fastqsanger.gz
	SRR13685313_2.fastq.gz	Fastqsanger.gz
	SRR13685314_1.fastq.gz	Fastqsanger.gz
	SRR13685314_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Epichloe typhina subsp. typhina strain:1756

Project description:Epichloe typhina Dg Genome sequencing and assembly

| PRJNA533210 | ENA

Epichloe typhina

Project description:Epichloe poae Pt Genome sequencing and assembly

| PRJNA702241 | ENA

Epichloe typhina

Project description:Epichloe poae Pn Genome sequencing and assembly

| PRJNA702240 | ENA

Epichloe typhina E8 strain:E8

Project description:Epichloe typhina E8 strain:E8 Genome sequencing and assembly

| PRJNA174036 | ENA

Transformation of Epichloe typhina by electroporation of conidia.

Project description:BackgroundChoke, caused by the endophytic fungus Epichloë typhina, is an important disease affecting orchardgrass (Dactylis glomerata L.) seed production in the Willamette Valley. Little is known concerning the conditions necessary for successful infection of orchardgrass by E. typhina. Detection of E. typhina in plants early in the disease cycle can be difficult due to the sparse distribution of hyphae in the plant. Therefore, a sensitive method to detect fungal infection in plants would provide an invaluable tool for elucidating the conditions for establishment of infection in orchardgrass. Utilization of a marker gene, such as the green fluorescent protein (GFP), transformed into Epichloë will facilitate characterization of the initial stages of infection and establishment of the fungus in plants.FindingsWe have developed a rapid, efficient, and reproducible transformation method using electroporation of germinating Epichloë conidia isolated from infected plants.ConclusionsThe GFP labelled E. typhina provides a valuable molecular tool to researchers studying conditions and mechanisms involved in the establishment of choke disease in orchardgrass.

| S-EPMC3058031 | biostudies-literature

Epichloe festucae var. lolii x Epichloe typhina "Lp1"

Project description:Epichloe hybrid Lp1 in culture transcriptome Including transcriptome sequencing of parental proxy species.

| PRJNA308860 | ENA

Epichloe population genomics

Project description:Analysis of genetic diversity and population structure of Epichloe fungal pathogens using pairwise population sampling of sibling species Epichloe typhina and Epichloe clarkii

| PRJEB59262 | ENA

Epichloe bromicola strain:AL0434

Project description:Epichloe bromicola AL0434 Genome sequencing and assembly

| PRJNA274994 | ENA

Epichloe sylvatica strain:GR10156

Project description:Epichloe sylvatica GR10156 Genome sequencing and assembly

| PRJNA275112 | ENA

Epichloe uncinata strain:e167

Project description:Epichloe uncinata e167 Genome sequencing and assembly

| PRJNA275109 | ENA