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The bacteroides fragilis(BF) in colorectal carcinogenesis

ABSTRACT: The bacteroides fragilis(BF) in colorectal carcinogenesis

PROVIDER: PRJNA534099 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR8942650_1.fastq.gz	Fastqsanger.gz
	SRR8942650_2.fastq.gz	Fastqsanger.gz
	SRR8942660_1.fastq.gz	Fastqsanger.gz
	SRR8942660_2.fastq.gz	Fastqsanger.gz
	SRR8942651_1.fastq.gz	Fastqsanger.gz

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The bacteroides fragilis(BF) in colorectal carcinogenesis

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Expression analysis of Bacteroides fragilis NCTC 9343 delta-ungD1 delta-ungD2

Project description:Investigation of whole genome gene expression level changes in a Bacteroides fragilis NCTC 9343 delta-ungD1 delta-ungD2 double mutant compared to the wild-type strain. Keywords: expression analysis A six chip study using total RNA recovered from three separate wild-type cultures of Bacteroides fragilis NCTC 9343 and three separate cultures of a double mutant strain, Bacteroides fragilis NCTC 9343 delta-ungD1 delta-ungD2, in which ungD1 (BF1706) and ungD2 (BF2848) are deleted. Each chip measures the expression level of 4,302 genes from Bacteroides fragilis NCTC 9343 and the associated plasmid pBF9343 with fourteen 24-mer probe pairs (PM/MM) per gene, with three-fold technical redundancy.

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Project description:Genome expression study of Bacteroides fragilis ATCC25285 strain containing the EcfO gene constitutively expressed from plasmid pFD340

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