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Lentinula edodes

ABSTRACT: Lentinula edodes Raw sequence reads

PROVIDER: PRJNA535345 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	SRR10127528_1.fastq.gz	Fastqsanger.gz
	SRR10127528_2.fastq.gz	Fastqsanger.gz
	SRR10127529_1.fastq.gz	Fastqsanger.gz
	SRR10127529_2.fastq.gz	Fastqsanger.gz
	SRR10127530_1.fastq.gz	Fastqsanger.gz

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Spore formation of Lentinula edodes (LongSAGE)

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Spore formation of Lentinula edodes

Project description:Gene expression profiles before and after spore formation of Lentinula edodes (L54)grown at sawdust. Keywords: time-course SAGE were used to generate tags from RNA of fruit bodies of L. edodes. RNA were extracted from the fruit bodies before and after spore observed. Gene expression profiles of both stages were compared to screen out genes may relate to spore formation.

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Spore formation of Lentinula edodes (LongSAGE)

Project description:Gene expression profiles before and after spore formation of Lentinula edodes (L54) grown at sawdust. SAGE were used to generate tags from RNA of fruit bodies of L. edodes. RNA were extracted from the fruit bodies before and after spore observed. Gene expression profiles of both stages were compared to screen out genes may relate to spore formation. To facilitate comparison of LongSAGE and SAGE data in GEO, LongSAGE tags (15bp) were trimmed to become 10bp and uploaded in previous submission (GSM87320, GSM87321). The current submission are actual LongSAGE experimental data without any extrapolation from SAGE data.

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Lentinula edodes strain:B17

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