Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Tetramorium immigrans ddradseq

PROVIDER: PRJNA539993 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR8980440.fastq.gz	Fastqsanger.gz
	SRR8980450.fastq.gz	Fastqsanger.gz
	SRR8980460.fastq.gz	Fastqsanger.gz
	SRR8980470.fastq.gz	Fastqsanger.gz
	SRR8980480.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 95

Similar Datasets

Tetramorium immigrans isolate:CASENT0742324

Project description:Tetramorium immigrans isolate:CASENT0742324 Genome sequencing and assembly

| PRJNA533534 | ENA

idDroImmi

Project description:Drosophila immigrans (fruitfly)

| PRJEB77576 | ENA

Drosophila immigrans

Project description:Drosophila immigrans overview

| PRJNA1035605 | ENA

Tetramorium bicarinatum

Project description:Tetramorium bicarinatum overview

| PRJNA271916 | ENA

idDroImmi1

Project description:Drosophila immigrans genome assembly, idDroImmi1

| PRJEB68150 | ENA

idDroImmi2

Project description:Drosophila immigrans genome assembly, idDroImmi2

| PRJEB68175 | ENA

Venomics reveals an ant venom peptidome

Project description:In this study, we used a venomics strategy to identify the molecular diversity of the venom peptidome from the myrmicine ant Tetramorium bicarinatum.

2018-08-29 | PXD010451 | Pride

De Novo Transcriptome Sequencing for Tetramorium bicarinatum: The first comprehensive venom gland transcriptome analysis from an ant species.

Project description:In order to provide a global insight on the transcripts expressed in the venom gland of the Brazilian ant species Tetramorium bicarinatum and to unveil the potential of its products, high-throughput expressed sequence tags were generated using Illumina paired-end sequencing technology. A total of 212,371,758 pairs of quality-filtered, 100-base-pair Illumina reads were obtained. The de novo assemblies yielded 36,042 contigs for which 27,873 have at least one predicted ORF among which 59.77% produce significant hits in the available databases. The investigation of the reads mapping toxin class revealed a high diversification with the major part consistent with the classical hymenopteran venom protein signature represented by venom allergen (33.3%) followed by a diverse toxin-expression profile including several distinct isoforms of phospholipase A1 and A2, venom serine protease, hyaluronidase, protease inhibitor and secapin. Moreover, our results revealed for the first time the presence of toxin-like peptides that have been previously identified from unrelated venomous animals such as waprin-like (snakes) and agatoxins (spiders and conus). 300 ant specimens from the species Tetramorium bicarinatum were dissected in order to extract the RNA from their venom gland, The whole ant body was used as a reference,

2015-01-08 | E-GEOD-53988 | biostudies-arrayexpress

Tetramorium tsushimae

Project description:Tetramorium tsushimae Raw sequence reads

| PRJNA772530 | ENA

New finding of the "end ant" (Tetramorium inquilinum, Ward et al 2015, ex Teleutomyrmex schneideri, Kutter 1950) at the type locality Saas-Fee and determination of the host species, Tet. alpestre Steiner et al, 2010

Project description:New finding of Tetramorium inquilinum

| PRJEB50154 | ENA