Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Alcaligenes ammonioxydans strain:HO-1

ABSTRACT: Alcaligenes sp. HO-1 Genome sequencing and assembly

PROVIDER: PRJNA543690 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Transcriptome data of Alcaligenes sp. HO-1 in response to ammonium stimulation at several time points.

Project description:A heterotrophic ammonia-oxidizing bacterium Alcaligenes sp. HO-1 was isolated from the activated sludge of a bioreactor treating ammonia-rich piggery wastewater. The goal and objectives of this experiment are to analyze the transcriptome profiles of nitrogen-metabolism-related genes of Alcaligenes sp. HO-1 in response to ammonium stimulation over time and to find out potential genes involved in ammonia oxidation process. So the RNA-seq anaylsis was performed by setting up each time points (0, 3.5, 10, 22 hours) when strain HO-1 were exposed to ammonia. HO-1 was cultured with 83 mM succinate and 14 mM ammonium sulfate until ammonia was completely consumed and then another 14 mM of ammonium sulfate was added to the culture. Cells were harvested at 0 h, 3.5 h, 10 h and 22 h after the addition of ammonium sulfate. The sequencing data of RNAs obtained from strain HO-1 cells at each time was analyzed.

2022-05-20 | GSE174685 | GEO

Hydrogenobaculum sp. HO strain:HO

Project description:Hydrogenobaculum sp. HO genome sequencing project

| PRJNA41741 | ENA

Alcaligenes sp. DN25

Project description:Alcaligenes sp. DN25 Genome sequencing and assembly

| PRJNA843993 | ENA

Alcaligenes sp. HPC1271

Project description:Alcaligenes sp. HPC1271 Genome sequencing and assembly

| PRJNA175407 | ENA

Alcaligenes sp. RS4

Project description:Alcaligenes sp. RS4 Genome sequencing and assembly