Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Lactobacillus

ABSTRACT: Genomics of lactobacilli isolated from European wild boar

PROVIDER: PRJNA544176 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR9107670_1.fastq.gz	Fastqsanger.gz
	SRR9107670_2.fastq.gz	Fastqsanger.gz
	SRR9107671_1.fastq.gz	Fastqsanger.gz
	SRR9107671_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 13

Similar Datasets

Lactobacillaceae

Project description:Genomics of lactic acid bacteria isolated from European wild boar

| PRJNA544254 | ENA

Project description:European Wild boar reference

| PRJNA791558 | ENA

Preliminary characterization of gene expression in European wild boar naturally infected with Brucella suis

2009-09-29 | GSE17492 | GEO

Transcription profiling of European wild boar naturally infected with Brucella suis

Project description:Brucella suis infects macrophages and dendritic cells. Wild boars act as reservoirs and carriers of Brucella suis biovar 2, and there is evidence that wild boar can be the main source of infection for domestic pigs through the venereal route. Transmission through this route could be an important path for disesease dissemination. The result from this study will contribute to the overall understanding of the molecular pathogenic mechanisms involved during Brucella suis infection in European wild boar. Experiment Overall Design: In this study we preliminarily characterized differential gene expression in European wild boar naturally infected with Brucella suis biovar 2 using Microarray hybridization and Real Time RT-PCR analysis. Since Brucella suis acts by infecting macrophages, we used spleen cells to analyze the gene expression response to Brucella suis infection.

2009-10-02 | E-GEOD-17492 | biostudies-arrayexpress

Lactobacillus

Project description:RNA-Seq of Vaginally Relevant Lactobacilli

| PRJNA599445 | ENA

Lactobacillus Rhamnosus in Prevention of Chemotherapy-related Diarrhoea

Project description:Chemotherapy may cause diarrhoea, which may be associated with treatment delay and infections. The purpose of the study is to investigate whether oral supplementation with lactobacilli will alleviate chemotherapy related diarrhoea. Patients diagnosed with advanced colorectal cancer and who will receive chemotherapy will be randomly assigned to receive either lactobacilli or placebo during chemotherapy. The study is a prospective, multicenter, randomized, double-blind, placebo-controlled study. The primary outcome measure is frequency of moderate/severe diarrhoea. The study will also address safety and tolerability of chemotherapy, response to chemotherapy, and serum growth factor levels.

| 2019339 | ecrin-mdr-crc

Project description:Whole genome sequencing of six lactobacilli isolates obtained from wild boar faecal samples

| PRJNA1104830 | ENA

Lactobacillus sp.

Project description:Formyl-Peptide Receptor 2 activating probiotic Lactobacilli

| PRJNA1107177 | ENA

Sus scrofa

Project description:Gene expression profiles of European wild boar naturally infected with Anaplasma phagocytophilum.

| PRJNA116803 | ENA

Next generation sequencing based transcriptomic analysis of bile stress response in Lactobacillus salivarius Ren

Project description:Lactobacillus salivarius is a member of the indigenous microbiota of the human gastrointestinal tract (GIT). Tolerance to bile stress is crucial for intestinal lactobacilli to survive in the GIT and to exert their beneficial actions. In this work, the Next-Generation Sequencing platform Illumina HiSeq 2000 was used to investigate the global response to bile in L. salivarius Ren, a potential probiotic strain isolated from a healthy centenarian. In the presence of 0.75 g liter-1 oxgall, the transcription of nearly 200 genes was detected to be associated with bile stress, including genes involved in carbohydrate and amino acid metabolism, cell envelope and fatty acid biogenesis, transcription and translation. This study improves our understanding on bile stress response in L. salivarius Ren.

2019-12-18 | GSE68033 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data