Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome-wide analysis of human monocytes cultured on wt- LX2 or CD44 ko LX2

ABSTRACT: Genome-wide analysis of human monocytes cultured on wt- LX2 or CD44 ko LX2

PROVIDER: PRJNA544414 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Genome-wide analysis of human monocytes cultured on wt- LX2 or CD44 ko LX2

Project description:Analyis of the induction of myeloid derived suppressor cells using the LX2 model

2020-02-17 | GSE131679 | GEO

Expression data from cultured human monocytes

Project description:Expression data from cultured human monocytes

| PRJNA604193 | ENA

Expression data from human hepatic stellate cell line LX2 treated with suberoylanilide hydroxamic acid (SAHA) or valproic acid (VPA)

Project description:Suberoylanilide hydroxamic acid (SAHA) and valproic acid (VPA) are both histone deacetylases inhibitor (HDACi), and are able to attenuate the activation of hepatic stelllate cells. To explore the underlying molecular mechanisms, we performed gene expression profile analyses of human hepatic stellate cell line LX2 treated with SAHA or VPA for 24 hours. Duplicate experiments were performed: Untreated LX2, SAHA treated LX2 and VPA treated LX2.

2016-04-07 | E-MTAB-3764 | biostudies-arrayexpress

miRNA expression data from human hepatic stellate cell line LX2 treated with suberoylanilide hydroxamic acid (SAHA) or valproic acid (VPA)

Project description:Suberoylanilide hydroxamic acid (SAHA) and valproic acid (VPA ) are both histone deacetylases inhibitor (HDACi), and are able to attenuate the activation of hepatic stelllate cells. To explore the underlying molecular mechanisms, we performed miRNA expression profile analyses of human hepatic stellate cell line LX2 treated with SAHA or VPA for 24 hours. Duplicate experiments were performed: Untreated LX2, SAHA treated LX2 and VPA treated LX2.

2019-07-20 | E-MTAB-6752 | biostudies-arrayexpress

Expression data from cultured mouse bone-marrow monocytes.

Project description:Expression data from cultured mouse bone-marrow monocytes.

| PRJNA604192 | ENA

Function of CD44 in white adipose tissue

Project description:Background CD44 is a transmembrane protein, which plays an essential role for transducing extracellular stimuli into intracellular signaling cascades especially in cancer cells. Recent studies have shown that CD44 may contribute to metabolic regulation. However, whether and how CD44 affects adipocyte differentiation in white adipose tissue (WAT) remain unclear. Wild type (WT) and CD44 knockout (KO) mice were fed with high-fat diet to induce obesity. eWAT from mice were then harvested for RNA-seq

2024-02-01 | GSE249338 | GEO

BNC2 cistrome and epigenome in myofibroblastic LX2 cells

Project description:LX2 cells were used for BNC2 and H3K27ac ChIP-seq as well as for CoP-seq

2022-08-07 | GSE185528 | GEO

Transcriptome and translatome of killing supernatant cultured human monocytes

Project description:To investigate whether metoprolol treatment could affect the transcriptome and translatome of killing supernatant cultured human monocytes

2023-07-31 | GSE195524 | GEO

Transcriptional profile of MORC3 deficient BLaER1 monocytes [KO]

Project description:Transcriptional profile of MORC3 deficient BLaER1 monocytes [KO]

| PRJNA757713 | ENA

Genome-wide chromatin accessibility changes in cultured primary human monocytes cultured at low density and high density.

Project description:ATAC sequencing of primary human monocytes cultured at low and high density. Monocytes isolated from PBMCs of 3 healthy donors were cultured at low density (1 x 10^6 cells/mL) or at high density (1 x10^7 cells/mL) for 24hrs and harvested for ATAC sequencing. Protein expression of FcgR2b is higher on monocytes in high density conditions compared to low density conditions, where expression is negligble. This study provides information on genome-wide chromatin accessibility changes that occur in high density culture in order to study associations with FcgR2b expression.

2022-04-13 | GSE166100 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data