Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Nursery root ITS

ABSTRACT: Root sequencing from nursery seedlings with fertiliser and fungicide amendment

PROVIDER: PRJNA544944 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9136360.fastq.gz	Fastqsanger.gz
	SRR9136370.fastq.gz	Fastqsanger.gz
	SRR9136380.fastq.gz	Fastqsanger.gz
	SRR9136390.fastq.gz	Fastqsanger.gz
	SRR9136400.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 71

Similar Datasets

Pinus patula nursery seedlings fungal samples

Project description:Pinus patula nursery seedlings fungal samples Raw sequence reads

| PRJNA494994 | ENA

GBR nursery CBASS

Project description:GBR nursery CBASS Transcriptome

| PRJNA1011835 | ENA

Nursery HVAC Microbiome

Project description:Bacterial composition of nursery HVAC filter dust

| PRJEB9521 | ENA

action of microgravity on root development-Action of microgravity on root development

Project description:au11-03_gravite - action of microgravity on root development - Action of microgravity on root development - Arabidopsis were grown on horizontal or vertical clinostat for 4, 8 or 12 days. Seedlings on horizontal clinostat were in simulated microgravity and seedlings on vertical clinostat are considered as a control. Comparison was made between plants grown on simulated microgravitry and vertical position.

2012-08-01 | GSE39631 | GEO

Single cell RNA sequencing of maize root

Project description:The root system is fundamental for maize growth and yield. The primary root system is the most important structure of maize seedlings and is the first organ that emerges at germination, providing water and nutrients for the growing seedlings. However, it is difficult to characterize them at single cell level, due to their complex and heterogeneous cell types. In this study, we profiled the transcriptomes of more than 7000 cells derived from maize root tips of seedlings grown on media with (nitrate+) or without nitrate (nitrate-).

2021-09-03 | GSE183171 | GEO

Transcriptome Analysis of Wounding-Induced Root to Shoot Communication in Arabidopsis thaliana.

2010-12-31 | GSE26374 | GEO

Effect of high temperature on Arabidopsis thaliana root tips

Project description:Plant roots located in the upper soil layers are prone to experience high temperatures. To gain insight into the effect of high temperature on root development and functioning, we exposed five-day-old Arabidopsis thaliana seedlings grown on agar plates to 30 °C for 48 hours, and compared the gene expression profile in the root tip with that from seedlings that remained at 22 °C.

2024-02-07 | GSE254973 | GEO

action of microgravity on root development-Action of microgravity on root development

2012-07-31 | E-GEOD-39631 | biostudies-arrayexpress

Role of cis-zeatin in root responses to phosphate starvation

Project description:In this work we show that root illumination influences Pi starvation responses, enhancing the root and shoot growth arrest and limiting the root/shoot ratio as well as root hair elongation. A comparative transcriptomic study using dark-grown roots (DGR) roots seedlings taht were grown with or without phosphate identifies several genes that respond to Pi deficiency that were not previously reported, likely by the negative effect of the root illumination.

2019-11-15 | GSE131096 | GEO

Transcriptome Analysis of Wounding-Induced Root to Shoot Communication in Arabidopsis thaliana.

Project description:Comparison of gene expression between shoots of root-wounded seedlings and shoots of control seedlings in Arabidopsis. We identified wounding-induced early (30 min) and late (360 min) root to shoot responsive genes (RtS). Two-condition experiment, shoots of root-wounded seedlings vs. shoots of control seedlings. Biological replicates: 2 control replicates, 2 treated replicates. Technical replicate: Dyeswap

2010-12-31 | E-GEOD-26374 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data