Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: long-chain n-alkanes-degrading culture

PROVIDER: PRJNA545407 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9157810_1.fastq.gz	Fastqsanger.gz
	SRR9157810_2.fastq.gz	Fastqsanger.gz
	SRR9157811_1.fastq.gz	Fastqsanger.gz
	SRR9157811_2.fastq.gz	Fastqsanger.gz
	SRR9157812_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 20

Similar Datasets

Project description:methanogenic iso-alkanes-degrading culture

| PRJNA449819 | ENA

Project description:Bioremediation of soils contaminated by long-chain alkanes

| PRJNA1186948 | ENA

hot springs metagenome

Project description:Thermophilic Hadarchaeota grow on long-chain alkanes in syntrophy with methanogens

| PRJNA1097016 | ENA

Differential Protein Expression During Growth on Medium Versus Long-Chain Alkanes in the Obligate Marine Hydrocarbon-Degrading Bacterium Thalassolituus oleivorans MIL-1

Project description:The marine obligate hydrocarbonoclastic bacterium Thalassolituus oleivorans MIL-1 metabolises a broad range of aliphatic hydrocarbons almost exclusively as carbon and energy sources. We used LC-MS/MS shotgun proteomics to identify proteins involved in aerobic alkane degradation during growth on medium- (n-C14) or long-chain (n-C28) alkanes.

2019-01-14 | PXD011824 | Pride

mixed culture metagenome

Project description:Methanogenic short chain alkane degrading enrichment culture Metagenome

| PRJNA271643 | ENA

Comparative transcriptome analysis reveals different adaptation mechanisms for degradation of very-long chain and normal-long chain alkanes in Dietzia sp. DQ12-45-1b

Project description:Comparative transcriptome analysis reveals different adaptation mechanisms for degradation of very-long chain and normal-long chain alkanes in Dietzia sp. DQ12-45-1b

| PRJNA734595 | ENA

oil production facility metagenome

Project description:Thermophilic methanogenic long-chain n-paraffins(C21-C30)-degrading enrichment cultures

| PRJNA635524 | ENA

lMoniliella spathulata an oil-degrading yeast, which promotes growth of barley in oil polluted soil

Project description:The yeast strain Moniliella spathulata SBUG-Y 2180 was isolated from oil-contaminated soil at the Tengiz oil field in the Atyrau region of Kazakhstan on the basis of its unique ability to use crude oil and its components as the sole carbon and energy source. This yeast used a large number of hydrocarbons as substrates (more than 150), including n-alkanes with chain lengths ranging from C10 to C32, monomethyl- and monoethyl-substituted alkanes (C9 – C23), n-alkylcyclo alkanes with alkyl chain lengths from 3 to 24 carbon atoms as well as substituted monoaromatic and diaromatic hydrocarbons. Metabolism of this huge range of hydrocarbon substrates produced a very large number of aliphatic, alicyclic and aromatic acids. 51 of these were identified by GC/MS analyses. This is the first report of the degradation and of the formation of such a large number of compounds by a yeast. Inoculation of barley seeds with M. spathulata SBUG-Y 2180 had a positive effect on shoot and root development of plants grown in oil-contaminated sand, pointing towards potential applications of the yeast in bioremediation of polluted soils.

2021-02-15 | PXD022543 | Pride

Saccharomyces cerevisiae BY4741 cells treated with n-alkanes

Project description:Transcripitonal profiling of Saccharomyces cerevisiae treated with 2% n-alkanes vs untreatment

2015-04-07 | GSE38653 | GEO

Draft genome of Syntrophomonas zehnderi

Project description:Draft genome of Syntrophomonas zehnderi – an obligate syntrophic bacterium degrading long chain fatty acids in co-culture with Methanobacterium formicicum

| PRJEB8634 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data