Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacillus cereus strain:TK1

ABSTRACT: Bacillus cereus strain:TK1 Genome sequencing and assembly

PROVIDER: PRJNA547474 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	VEPS02.dat.gz	Other
	VEPS02.fasta.gz	Fasta.gz
	VEPS02.master.dat	Other
	SRR12042680_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Distinct roles of ComK1 and ComK2 in gene regulation in Bacillus cereus (overexpressed ComK)

Project description:Comparison of the Bacillus cereus with overexpressed Bacillus subtilis ComK (Bacillus cereus pNWcomKBsu) vs Bacillus cereus carrying empty plasmid (Bacillus cereus pNW33N)

2011-07-28 | GSE27265 | GEO

Bacillus cereus strain 31673

Project description:Comparative Genomic Hybridization. Analysis of genomic content of closely related Bacillus species. Refer to individual records for strain information. Refer to platform and individual sample records for experimental protocols. Keywords: other

2004-10-28 | GSE568 | GEO

Comparative transcriptome and phenotype analysis of acid-stressed Bacillus cereus strains

Project description:This SuperSeries is composed of the following subset Series: GSE13711: Comparative transcriptome and phenotype analysis of acid-stressed Bacillus cereus strain ATCC 14579 GSE13729: Comparative transcriptome and phenotype analysis of acid-stressed Bacillus cereus strain ATCC 10987 Refer to individual Series

2010-06-25 | E-GEOD-13773 | biostudies-arrayexpress

Bacillus cereus strain proteomics under fermentative anoxic conditions, cellular proteome

Project description:This project provides tandem mass spectrometry datasets of Bacillus cereus ATCC 14579 wild-type strain without its pBClin15 plasmid. The strain was grown under fermentative anaerobic condition and harvested at three growth stages.

2021-09-10 | PXD024888 | Pride

Bacillus cereus strain proteomics grown in glucose containing medium, cellular proteome

Project description:This project provides tandem mass spectrometry data of Bacillus cereus AH187 strain. The strain was grown on liquid MOD medium supplemented with glucose and harvested at three growth stages.

2022-02-22 | PXD030118 | Pride

Bacillus cereus msrA mutant strain proteomics under fermentative anoxic conditions, exoproteome

Project description:This project provides tandem mass spectrometry datasets of Bacillus cereus ATCC 14579 wild-type strain without its pBClin15 plasmid and devoided of the methionine sulfoxide reductase A (msrA) gene. The single mutant strain was grown under fermentative anaerobic condition and harvested at three growth stages.

2021-09-10 | PXD024847 | Pride

Bacillus cereus msrAB mutant strain proteomics under fermentative anoxic conditions, exoproteome

Project description:This project provides tandem mass spectrometry datasets of Bacillus cereus ATCC 14579 wild-type strain without its pBClin15 plasmid and devoided of the methionine sulfoxide reductase AB (msrAB) gene. The single mutant strain was grown under fermentative anaerobic condition and harvested at three growth stages.

2021-09-10 | PXD024714 | Pride

Effect of Combined Bifidobacterium, Lactobacillus, Enterococcus and Bacillus Cereus Tablets on Chemotherapy and Radiotherapy of Colorectal Cancer

Project description:Interventions: experimental group:Orally take Combined Bifidobacterium, Lactobacillus, Enterococcus and Bacillus cereus Tablets;control group:Orally take placebo Study Design: Parallel

| 2701106 | ecrin-mdr-crc

Bacillus cereus ctaA mutant strain proteomics grown in glucose containing medium, exoproteome

Project description:This project provides tandem mass spectrometry data of Bacillus cereus AH187 strain devoid of the heme A synthase (CtaA) protein. The mutant strain was grown on liquid MOD medium supplemented with glucose and harvested at three growth stages.

2022-02-22 | PXD030163 | Pride

Study of Bacillus cereus spore germination and outgrowth in a vegetable food model by means of genome-wide transcriptome analysis

Project description:Pathogenic species belonging to Bacillus cereus sensu lato group possess a high evolutionary advantage in the environment and in food matrices thanks to their capacity to survive as silent spores to harsh environmental insults and grow at relatively low temperatures. Ready to re-heat products are at severe risk for contamination by members of Bacillus cereus s.l. group if not stored at proper conditions. In this work, the goal was to assess, by means of a genome-wide transcriptional assay, the isolated strain Bacillus cereus UC10070 gene expression behind the process of spore germination and consequent outgrowth in an artificially contaminated vegetable-based food model. A vegetable food model subjected to a heat treatment was determined to present favourable conditions for spores germination. Microscopic analyses together with OD measurements were applied to select the key steps of B. cereus cell cycle to be used for the microarray analysis. Using this approach we found a total of 1,646 probe sets differentially expressed and modulated during the entire B. cereus life cycle in the vegetable foodstuff.

2015-01-26 | GSE65259 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data