Neogobius melanostomus
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA547711 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| SRR9317360.fastq.gz | Fastqsanger.gz | |||
| SRR9317360_1.fastq.gz | Fastqsanger.gz | |||
| SRR9317360_2.fastq.gz | Fastqsanger.gz | |||
| SRR9317361_1.fastq.gz | Fastqsanger.gz | |||
| SRR9317361_2.fastq.gz | Fastqsanger.gz |
Items per page: 5 1 - 5 of 31 |
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Project description:Neogobius melanostomus Raw sequence reads
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Project description:Neogobius melanostomus isolate:20150602_KH_C Genome sequencing and assembly
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Project description:Neogobius melanostomus, the round goby, was recorded by underwater video feeding on crushed dreissenid mussels at a depth of 12 m in Georgian Bay of Lake Huron, a Laurentian Great Lake. In the video, gobies used rotational or twist feeding to tear away particles from crushed mussels. At least 43 examples of this feeding maneuver occur in the video. Up to 120 gobies m-2 were visible at a time in the video. Mean standard length of gobies appearing in the video was 37 mm. Mean standard length of fish exhibiting twist feeding was larger, 48 mm. Mean size of intact mussels in visible clusters was about 10×20 mm, a size which exceeds the gape width of the largest gobies observed in the video. Neogobius melanostomus is known to use twisting to wrest small attached mussels from the substrates which can be crushed by their pharyngeal teeth. I surmise that the behavior observed in the video is an opportunistic manifestation of this inherent behavioral adaptation to overcome gap limitation and exploit a temporary windfall of food.
| S-EPMC5903586 | biostudies-literature
Project description:Environmental DNA (eDNA) is revolutionizing biodiversity monitoring, occupancy estimates, and real-time detections of invasive species. In the Great Lakes, the round goby (Neogobius melanostomus), an invasive benthic fish from the Black Sea, has spread to encompass all five lakes and many tributaries, outcompeting or consuming native species; however, estimates of round goby abundance are confounded by behavior and habitat preference, which impact reliable methods for estimating their population. By integrating eDNA into round goby monitoring, improved estimates of biomass may be obtainable. We conducted mesocosm experiments to estimate rates of goby DNA shedding and decay. Further, we compared eDNA with several methods of traditional field sampling to compare its use as an alternative/complementary monitoring method. Environmental DNA decay was comparable to other fish species, and first-order decay was lower at 12°C (k = 0.043) than at 19°C (k = 0.058). Round goby eDNA was routinely detected in known invaded sites of Lake Michigan and its tributaries (range log10 4.8-6.2 CN/L), but not upstream of an artificial fish barrier. Traditional techniques (mark-recapture, seining, trapping) in Lakes Michigan and Huron resulted in fewer, more variable detections than eDNA, but trapping and eDNA were correlated (Pearson R = 0.87). Additional field testing will help correlate round goby abundance with eDNA, providing insight on its role as a prey fish and its impact on food webs.
| S-EPMC5777661 | biostudies-literature
Project description:Freshwater ecosystems are increasingly impacted by alien invasive species which have the potential to alter various ecological interactions like predator-prey and host-parasite relationships. Here, we simultaneously examined predator-prey interactions and parasitization patterns of the highly invasive round goby (Neogobius melanostomus) in the rivers Rhine and Main in Germany. A total of 350 N. melanostomus were sampled between June and October 2011. Gut content analysis revealed a broad prey spectrum, partly reflecting temporal and local differences in prey availability. For the major food type (amphipods), species compositions were determined. Amphipod fauna consisted entirely of non-native species and was dominated by Dikerogammarus villosus in the Main and Echinogammarus trichiatus in the Rhine. However, the availability of amphipod species in the field did not reflect their relative abundance in gut contents of N. melanostomus. Only two metazoan parasites, the nematode Raphidascaris acus and the acanthocephalan Pomphorhynchus sp., were isolated from N. melanostomus in all months, whereas unionid glochidia were only detected in June and October in fish from the Main. To analyse infection pathways, we examined 17,356 amphipods and found Pomphorhynchus sp. larvae only in D. villosus in the river Rhine at a prevalence of 0.15%. Dikerogammarus villosus represented the most important amphipod prey for N. melanostomus in both rivers but parasite intensities differed between rivers, suggesting that final hosts (large predatory fishes) may influence host-parasite dynamics of N. melanostomus in its introduced range.
| S-EPMC4206283 | biostudies-literature
Project description:Alternative reproductive tactics are characterized by the occurrence of discrete alternative morphs that differ in behavioural, morphological and physiological traits within the same sex. Although much effort has been made to describe the behaviour, morphology and physiology of such alternative morphs, less effort has been invested investigating how much overlap there is in the characteristics of such morphs in natural populations. We studied random population samples of the invasive Round Goby Neogobius melanostomus from five different localities in the river Rhine system in the Netherlands. We found two morphologically and physiologically distinct male morphs which likely represent alternative reproductive tactics. Almost all mature males under 9.35 cm total length had a gonadosomatic index > 3%, suggestive of a sneaker tactic, while nearly all males above 9.35 cm has a gonadosomatic index of < 3%, suggestive of a parental tactic. Cheek size and eye diameter alone were sufficient to distinguish the two morphs. Gonads had a different relationship with size in the two morphs, indicating separate growth trajectories. The gonad mass of sneaker morphs would be ca. 7.5 times as high as the gonad mass of parental morphs of the same total length after extrapolation. Few (9%) intermediates were found, suggesting that the expression of alternative reproductive tactics is determined before the first breeding season. This contrasts with studies on other goby species, which show evidence of plastic tactics that can be affected by social circumstances. We conclude that it is possible to distinguish two alternative male morphs in the Dutch Round Goby population using morphological measurements alone. Although behavioural observations are needed to provide conclusive evidence, the difference in GSI between these morphs indicates that these morphs reflect alternative reproductive tactics.
| S-EPMC5378390 | biostudies-literature
Project description:Unionid Mussels ingested by the Round Goby (Neogobius melanostomus)
| PRJNA813547 | ENA