Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudomonas aeruginosa strain:P1-100 | breed:LB

ABSTRACT: Pseudomonas aeruginosa strain:P1-100 | breed:LB Raw sequence reads

PROVIDER: PRJNA550363 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9866160_1.fastq.gz	Fastqsanger.gz
	SRR9866160_2.fastq.gz	Fastqsanger.gz
	SRR9866170_1.fastq.gz	Fastqsanger.gz
	SRR9866170_2.fastq.gz	Fastqsanger.gz
	SRR9866180_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 200

Similar Datasets

Staphylococcus aureus strain:J46-100 | breed:LB

Project description:Staphylococcus aureus strain:J46-100 | breed:LB Raw sequence reads

| PRJNA550358 | ENA

LB-100 (PP2A Inhibitor) and Azenosertib (WEE1 Inhibitor) in Metastatic Colorectal Cancer Patients

Project description:This Phase Ib trial studies the side effects and best dose of LB-100 and azenosertib for the treatment of patients with metastatic colorectal cancer. Azenosertib blocks a protein that is involved in the repair of damaged DNA, this protein is called WEE1. Inhibiting WEE1 drives cancer cells into a state of cell division without repair of the damaged DNA, resulting in cell death. LB-100 has been shown to make anticancer drugs work better at killing cancer. LB-100 blocks a protein called PP2A. Blocking this protein increases the stress signals for the tumor cells that express PP2A. Research has shown that azenosertib and LB-100 may enhance each others effect when treating metastatic colorectal cancer.

| 116295 | ecrin-mdr-crc

SigX ECF sigma factor deletion mutant expression profile in Pseudomonas aeruginosa H103 in LB medium

Project description:Analysis of a SigX knockout mutant of Pseudomonas aeruginosa H103 strain in LB.

2018-12-01 | GSE117438 | GEO

LB-100 (PP2A Inhibitor) and Atezolizumab (PD-L1 Inhibitor) in Metastatic Colorectal Cancer Patients

Project description:This Phase Ib trial studies the side effects and best dose of LB-100 when given with atezolizumab for the treatment of patients with metastatic microsatellite stable colorectal cancer. Immunotherapy with monoclonal antibodies, such as atezolizumab, may help the body’s immune system attack the cancer, and may interfere with the ability of the tumor to grow and spread. LB-100 has been shown to make anticancer drugs work better at killing cancer. LB-100 blocks a protein on the surface of cells called PP2A. Blocking this protein increases the stress signals for the tumor cells that express PP2A. Giving atezolizumab in combination with LB-100 may work better to treat metastatic colorectal cancer patients as the cancer cells that experience increased stress signals are more susceptible for the immunotherapy.

| 71807 | ecrin-mdr-crc

PAHM4 vs PAO1 37C LB

Project description:Pseudomonas aeruginosa strains PAHM4 and PAO1 were grown at 37C on LB and RNA was hybridized on the Affymetrix P. aeruginosa chip to compare transcript differences from a BQ isolate to a well characterized wound isolate.

2012-10-01 | GSE40461 | GEO

Stenotrophomonas sp. P2112 breed:LB

Project description:Stenotrophomonas sp. P2112 breed:LB Genome sequencing and assembly

| PRJNA1153125 | ENA

Pseudomonas aeruginosa strain:PFL-P1

Project description:Genome sequencing and assembly of Pseudomonas aeruginosa PFL-P1

| PRJNA599323 | ENA

Ectopseudomonas chengduensis strain:BC1815 | breed:LB

Project description:Ectopseudomonas chengduensis strain:BC1815 | breed:LB Genome sequencing and assembly

| PRJNA888421 | ENA

Peribacillus sp. R9-11 breed:LB

Project description:Peribacillus sp. R9-11 breed:LB Genome sequencing and assembly

| PRJNA1010959 | ENA

P. aeruginosa and indole and 7-hydroxyindole

Project description:We used DNA microarrays to investigate the impact of indole and 7-hdroxyindole on P. aeruginosa PAO1.For the microarray experiments, 10 g glass wool (Corning Glass Works, Corning, N.Y.) were used to form biofilms in 250 mL in 1 L Erlenmeyer shake flasks which were inoculated with overnight cultures of P. aeruginosa PAO1 diluted that were 1:100. For P. aeruginosa with 7-hydroxyindole and indole, 500 uM 7-hydroxyindole in 250 uL DMF, 1000 uM indole in 250 uL DMF, or 250 uL DMF alone were added to cells grown in LB. The cells were shaken at 250 rpm and at 37oC for 7 h to form biofilms on the glass wool, and RNA was isolated from the biofilm cells. Keywords: comparison with E. coli signal indole on P. aeruginosa PAO1

2008-11-21 | GSE10065 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data