Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Aphanomyces euteiches

ABSTRACT: Aphanomyces euteiches overview

PROVIDER: PRJNA551525 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	VJMJ01.dat.gz	Other
	VJMJ01.fasta.gz	Fasta.gz
	VJMJ01.master.dat	Other
	SRR18327310_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 48

Similar Datasets

Aphanomyces euteiches

Project description:Aphanomyces euteiches Genome sequencing

| PRJNA816123 | ENA

Medicago truncatula roots infected (or not) with the oomycete Aphanomyces euteiches

Project description:The objective of this study was to evaluate the effect of the oomycete Aphanomyces euteiches (strain ATCC201684) on the legume model Medicago truncatula (F83005-5 line) transcritpome.

2018-03-15 | GSE109500 | GEO

Transcription profiling of Medicago roots from MtTi2i vs control after infection with Aphanomyces euteiches

Project description:Comparsion of root transcriptome profiles after Aphanomyces euteiches infections between control and MtTi2i-lines

2006-03-03 | E-MEXP-572 | biostudies-arrayexpress

Aphanomyces euteiches strain:MF1

Project description:Aphanomyces euteiches strain:MF1 Genome sequencing and assembly

| PRJNA767766 | ENA

Aphanomyces euteiches strain:RB84

Project description:Aphanomyces euteiches strain:RB84 Genome sequencing and assembly

| PRJNA767773 | ENA

Aphanomyces euteiches strain:EG109

Project description:Aphanomyces euteiches strain:EG109 Genome sequencing and assembly

| PRJNA767593 | ENA

Aphanomyces euteiches strain:NC1

Project description:Aphanomyces euteiches strain:NC1 Genome sequencing and assembly

| PRJNA767769 | ENA

Sesquiterpenes produced in roots of Medicago truncatula play a role in defense against Aphanomyces euteiches

Project description:Inoculation of Medicago truncatula roots with zoospores of the oomycetic pathogen Aphanomyces euteiches leads to rapid upregulation of a gene encoding a sesquiterpene synthase followed by release of sesquiterpenes that may have a defense function against A. euteiches.

2019-10-15 | E-MTAB-7286 | biostudies-arrayexpress

Transcriptomic analysis of pea during interaction with Phytophthora pisi and Aphanomyces euteiches

Project description:This experiment captures the gene expression data from pea roots during interaction with two pathogenic oomycetes: Phytophthora pisi and Aphanomyces euteiches, at 6 hours and 20 hours after infection and the control samples at each time point. In this experiment medicago genome array is used.

2015-10-01 | E-MTAB-3748 | biostudies-arrayexpress

affy_med_2011_10- Comparison of plant responses upon Aphanomyces euteiches infection in wild type (A17) line and in the lyr3-1 and lyr3-2 mutants

Project description:affy_med_2011_10 - affy_med_2011_10 - LYR3 encodes a lysin motif-receptor-like kinase (LysM-RLK) that consists of an extracellular ligand-binding domain composed of three LysM domains, a single transmembrane domain and a cytoplasmic serine/threonine kinase domain. A reverse genetic approach was undertaken to study the role of this gene in the pathosystem Medicago truncatula – Aphanomyces euteiches (Ae). Results suggest that lyr3-1 and lyr3-2 mutants are more susceptible to the root pathogen Aphanomyces euteiches than the A17 wild type (WT) line. In this study, we want to compare the early plant responses, 3 days post inoculation (dpi), between WT and the lyr3-1 and lyr3-2 mutants, in order to identify LYR3-dependent gene networks during infection.-Fourteen days old A17, lyr3-1 or lyr3-2 plants were grown in vitro on M medium. The entire roots were then inoculated (or not = controls) with A. euteiches zoospores (105/ml) and harvested three days after inoculation. Three independent repeats were performed.

2014-02-28 | GSE43715 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data