Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Epimutations in Caenorhabditis elegans mutation accumulation lines

PROVIDER: PRJNA553063 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9650400.fastq.gz	Fastqsanger.gz
	SRR9650410.fastq.gz	Fastqsanger.gz
	SRR9650420.fastq.gz	Fastqsanger.gz
	SRR9650430.fastq.gz	Fastqsanger.gz
	SRR9650440.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 120

Similar Datasets

Caenorhabditis elegans

Project description:Raw sequence reads of Caenorhabditis elegans mutation accumulation lines

| PRJNA665851 | ENA

Project description:Mutational Variation in Caenorhabditis elegans Mutation Accumulation Lines of Differing Population Size

| PRJNA352429 | ENA

The transcriptional consequences of mutation and natural selection in Caenorhabditis elegans

Project description:This set of arrays contains all microarray experiments done involving comparisons among C. elegans natural isolates and mutation-accumulation lines. Abstract: The evolutionary importance of gene-expression divergence is unclear: some studies suggest that it is an important mechanism for evolution by natural selection, whereas others claim that most between-species regulatory changes are neutral or nearly neutral. We examined global transcriptional divergence patterns in a set of Caenorhabditis elegans mutation-accumulation lines and natural isolate lines to provide insights into the evolutionary importance of transcriptional variation and to discriminate between the forces of mutation and natural selection in shaping the evolution of gene expression. We detected the effects of selection on transcriptional divergence patterns and characterized them with respect to coexpressed gene sets, chromosomal clustering of expression changes and functional gene categories. We directly compared observed transcriptional variation patterns in the mutation-accumulation and natural isolate lines to a neutral model of transcriptome evolution to show that strong stabilizing selection dominates the evolution of transcriptional change for thousands of C. elegans expressed sequences. An all pairs experiment design type is where all labeled extracts are compared to every other labeled extract. Computed

2006-01-31 | E-GEOD-4123 | biostudies-arrayexpress

Project description:C. elegans 300-generation mutation accumulation lines

| PRJNA1089216 | ENA

The transcriptional consequences of mutation and natural selection in Caenorhabditis elegans

2006-02-01 | GSE4123 | GEO

Project description:Recombinant inbred C. elegans mutation accumulation (MA) lines

| PRJNA1083210 | ENA

Caenorhabditis elegans breed:Bristol | cultivar:N2

Project description:Experimental Mutation Accumulation in Caenorhabditis elegans under Differing Population Size

| PRJNA448413 | ENA

DNA sequencing of Caenorhabditis elegans recombinant inbred lines containing a human alpha-synuclein trans-gene

Project description:Recombinant inbred lines were created by crossing the alpha-synuclein containing Caenorhabditis elegans strains NL5901 and SCH4856. These strains contain the human alpha-synuclein gene fused to YFP and under the control of an unc-54 promotor (unc-54p::alpha-synnuclein::YFP) in an N2 and CB4856 genetic background, respectively. These two strains were used to generate a total of 212 recombinant inbred lines, of which 88 were genotyped by whole-genome sequencing using a MiSeq. These recombinant inbred lines can be used for mapping genetic modifiers affecting protein accumulation.

2023-06-30 | E-MTAB-12575 | biostudies-arrayexpress

PB306 and three MALs

Project description:Whole-genome re-sequencing of the wild isolate PB306 (Caenorhabditis elegans nematode) and three derived Mutation Accumulation Lines

| PRJEB30822 | ENA

Drosophila melanogaster

Project description:Drosophila melanogaster mutation accumulation lines

| PRJNA91737 | ENA