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Salmonella enterica subsp. enterica serovar Typhimurium strain:14028S

ABSTRACT: Salmonella enterica subsp. enterica serovar Typhimurium strain:14028S Transcriptome or Gene expression

PROVIDER: PRJNA554270 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR10802358.fastq.gz	Fastqsanger.gz
	SRR10802359.fastq.gz	Fastqsanger.gz
	SRR10802360.fastq.gz	Fastqsanger.gz
	SRR10802361.fastq.gz	Fastqsanger.gz
	SRR10802362.fastq.gz	Fastqsanger.gz

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Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to lettuce media

Project description:Summary: Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to lettuce medium (LM) and lettuce root exudates (LX) to minimal medium (MM). Purpose: Salmonella mRNA profile, when grown in different media was compared to minimal medium to reveal environment specific transcriptional changes. Methods: mRNA profiles were generated using Illumina HiSeq in triplicates. The sequences were analysed using Bowtie2 followed by Cufflinks.

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Project description:Summary: Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to DS soil suspension (DS) and suspension of autoclaved DS soil (DA) compared to minimal medium (MM). Purpose: Salmonella mRNA profile, when grown in different media was compared to minimal medium to reveal environment specific transcriptional changes. Methods: mRNA profiles were generated using Illumina HiSeq in triplicates. The sequences were analysed using Bowtie2 followed by Cufflinks.

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PacBio SMRT-seq of wild-type, ∆metJ, and ∆yhdJ Salmonella enterica serovar Typhimurium (14028s)

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