Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptome analysis of CHI3L1 knockdown NP cells

ABSTRACT: Transcriptome analysis of CHI3L1 knockdown NP cells

PROVIDER: PRJNA557839 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9879242_1.fastq.gz	Fastqsanger.gz
	SRR9879242_2.fastq.gz	Fastqsanger.gz
	SRR9879243_1.fastq.gz	Fastqsanger.gz
	SRR9879243_2.fastq.gz	Fastqsanger.gz
	SRR9879244_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Transcriptome analysis of CHI3L1 knockdown NP cells

Project description:Intervertebral disc degeneration is the main cause of low back pain and the mechanism of which is far from fully revealed. Although multiple factors are related to the intervertebral disc degeneration, inflammation and matrix metabolism dysregulation are the two key factors that play an important role in degeneration. Here, we found that inflammation-related factor CHI3L1 is highly regulated in the nucleus pulposus during degeneration in both RNA and protein level. Immunohistochemical analysis show that the expression of CHI3L1 are NP tissue specific, and increased significantly in the degenerated nucleus pulposus cells. The mechanism of CHI3L1 is thus studied in this experiment.

2020-02-11 | GSE135219 | GEO

Transcriptome analysis of CHSY3 knockdown NP cells

Project description:Transcriptome analysis of CHSY3 knockdown NP cells

| PRJNA607799 | ENA

Transcriptome analysis of CHI3L1 silencing in thyroid cancer cells

Project description:CHI3L1 (Chitinase-3-like protein 1), also known as YKL-40, has been associated with inflammation and cancer. Transcription profiling analysis was performed in FTC-133 thyroid cancer cells transfected with control siRNA or siRNAs against CHI3L1.

2020-02-12 | GSE145077 | GEO

Transcriptome analysis of Chi3l1-deficient TFH cells

Project description:Transcriptome analysis of Chi3l1-deficient TFH cells

| PRJNA838596 | ENA

Transcriptome analysis of Chi3l1-deficient TFH cells

Project description:To better understand how Chi3l1 regulates the TFH response, we analyzed the transcriptome of CXCR5+PD1+CD4+Lin- TFH cells from msLNs of WT and Chi3l1-/- mice on D14 post H. pylori infection.

2023-07-19 | GSE203113 | GEO

Transcriptome analysis of CHI3L1 silencing in thyroid cancer cells

Project description:Transcriptome analysis of CHI3L1 silencing in thyroid cancer cells

| PRJNA605952 | ENA

Transcriptome analysis of CHSY3 knockdown NP cells

Project description:Intervertebral disc degeneration is the main cause of low back pain and the mechanism of which is far from fully revealed. Although multiple factors are related to the intervertebral disc degeneration, inflammation and matrix metabolism dysregulation are the two key factors that play an important role in degeneration. Here, we found that CHSY3 is highly related to the nucleus pulposus degeneration. We generated CHSY3 knockout mice using Crisper/Cas9 system, and the NP cells are studied in this experiment.

2022-01-02 | GSE145649 | GEO

Project description:NP Metagenome

| PRJNA724020 | ENA

Transcriptome analysis of SAP30BP knockdown cells

Project description:Transcriptome analysis of SAP30BP knockdown cells

| PRJNA911836 | ENA

Transcriptome analysis of SFP45 knockdown cells

Project description:Transcriptome analysis of SFP45 knockdown cells

| PRJNA557481 | ENA