Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bioreactor metagenome

ABSTRACT: Biofilm microbial communities from bioreactors in Pennsylvania, USA

PROVIDER: PRJNA559552 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR9951156_1.fastq.gz	Fastqsanger.gz
	SRR9951156_2.fastq.gz	Fastqsanger.gz
	SRR9951157_1.fastq.gz	Fastqsanger.gz
	SRR9951157_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Linking microbial community structure and function during the anaerobic digestion of grass

Project description:In this study, microbial communities from triplicate leach-bed anaerobic bioreactors digesting grass were analysed. Each reactor comprised two microbial fractions, one immobilized on grass (biofilm) and the other in a planktonic state present in the leachate. Microbial communities from the two fractions were systematically investigated for community composition and function. This was carried out using DNA, RNA and protein co-extraction. The microbial structure of each fraction was examined using 16S rRNA deep sequencing, while the active members of the consortia were identified using the same approach on cDNA generated from co-extracted RNA samples. Microbial function was investigated using a metaproteomic workflow combining SDS-PAGE and LC-MS/MS analysis.

2018-10-23 | PXD007956 | Pride

Comparison of microbial communities with different carbon source types

Project description:We reported the microbial communities in the biofilm anoxic-oxic-MBR system operated with different carbon source types.

2019-10-19 | GSE139113 | GEO

bioreactor metagenome

Project description:Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 7_21_20_110_A3 metaG metagenome

| PRJNA406028 | ENA

bioreactor metagenome

Project description:Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 9_31_10_142_A3 metaG metagenome

| PRJNA406030 | ENA

bioreactor metagenome

Project description:Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 10_41_5_180_A2 metaG metagenome

| PRJNA406031 | ENA

bioreactor metagenome

Project description:Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 12_48_3.3_201_A2 metaG metagenome

| PRJNA406033 | ENA

bioreactor metagenome

Project description:Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 13_49_3.3_201_A3 metaG metagenome

| PRJNA406034 | ENA

bioreactor metagenome

Project description:Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 15_59_3.3_214_A2 metaG metagenome

| PRJNA406036 | ENA

bioreactor metagenome

Project description:Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 16_60_3.3_214_A3 metaG metagenome

| PRJNA406037 | ENA

bioreactor metagenome

Project description:Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 8_30_10_142_A2 metaG metagenome

| PRJNA406029 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data