Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression of E.coli challenged green rice leafhopper Nephotettix cincticeps.

ABSTRACT: Gene expression of E.coli challenged green rice leafhopper Nephotettix cincticeps.

PROVIDER: PRJNA560866 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Gene expression of E.coli challenged green rice leafhopper Nephotettix cincticeps.

Project description:The green rice leafhopper Nephotettix cincticeps have two mutualistic symbiotic bacteria (Candidatus Sulcia muelleri and Candidatus Nasuia deltocephalinicola) in its symbiont special organ bacteriome and are also infected to rickettsia. In order to determine immune challenge is induced or not in N. cincticeps, we investigated gene expression of Escherichia coli challenged N. cincticeps.

2019-08-20 | GSE135974 | GEO

Gene expression of Rickettsia infected green rice leafhopper Nephotettix cincticeps.

Project description:The green rice leafhopper Nephotettix cincticeps have two mutualistic symbiotic bacteria (Candidatus Sulcia muelleri and Candidatus Nasuia deltocephalinicola) in its symbiont special organ bacteriome and are also infected to rickettsia. In order to determine immune challenge is induced or not by rickettsia infection in N. cincticeps, we investigated gene expression between rickettsia-infected and rifampicin treated uninfected N. cincticeps colonies.

2019-08-20 | GSE135973 | GEO

Gene expression of Rickettsia infected green rice leafhopper Nephotettix cincticeps.

Project description:Gene expression of Rickettsia infected green rice leafhopper Nephotettix cincticeps.

| PRJNA560863 | ENA

Nephotettix cincticeps

Project description:Nephotettix cincticeps overview

| PRJNA283154 | ENA

Nephotettix cincticeps

Project description:Peptidoglycan recognition protein genes expressed in the green rice leafhopper Nephotettix cincticeps

| PRJDB8711 | ENA

Nephotettix cincticeps

Project description:Nephotettix cincticeps Raw sequence reads

| PRJNA869491 | ENA

Nephotettix cincticeps

Project description:Nephotettix cincticeps Raw sequence reads

| PRJNA493495 | ENA

Nephotettix cincticeps

Project description:Nephotettix cincticeps Raw sequence reads

| PRJNA925901 | ENA

Nephotettix cincticeps

Project description:Nephotettix cincticeps Genome sequencing and assembly

| PRJNA717963 | ENA

Combined transcriptome and proteome analysis of the protein composition of the brochosomes of the leafhopper Nephotettix cincticeps

Project description:Brochosomes are a unique coating on the integuments of Cicadellidae produced in specialized glandular sections of Malpighian tubules. However, knowledge of the protein composition of brochosome is very limited. In this study, transcriptomic and proteomic profiling was performed to characterize the protein composition of the brochosome in rice green leafhopper Nephotettix cincticeps. Brochosomes were collected from the forewings of leafhoppers using ultrasonic treatment allowing for more effective brochosome collection and shock treatment resulting in purer brochosomes . After combined proteomic and transcriptomic analysis, 12 putative major structural proteins of the brochosome (BSM) and 10 brochosome-associated proteins (BSAP) were identified. Each BSM has specific conserved motifs containing several cysteines cross-linked by disulfide bonds. BSAP, which may be loosely linked to the outer and inner surfaces of the brochosomes, might play an important role in the proper folding of the BSM and resisting pathogens. Apart from a few BSAPs associated with cyclase, homologs of BSM and BSAP were present exclusively in the insect family Cicadellidae rather than other Hemiptera species, suggesting that these proteins might be encoded by an orphan gene family specific to the Cicadellidae. This is the first study to identify and characterize the protein composition of the brochosome of N. cincticeps, which will provide a solid foundation for further studies of brochosome synthesis, function, and evolutionary origins.

2024-01-26 | PXD039863 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data