Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Whole Genome Sequencing of an Extreme Halophyte Salicornia brachiata Reference Project

PROVIDER: PRJNA564191 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10076754_1.fastq.gz	Fastqsanger.gz
	SRR10076754_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Salicornia bigelovii responses to NaCl

Project description:This project focused on the identification of membrane proteins involved in salinity tolerance in the halophyte Salicornia bigelovii. Salicornia bigelovii plants were treated with 0, 50, 200, and 600 mM NaCl for 6 weeks. Membrane preparations for each treatment were obtained in triplicates and were separated into 12 fractions per sample through a continuous sucrose gradient. Based on protein relative abundances per fraction, organellar membrane proteomes were generated. Protein abundances were also compared across treatments.

2024-04-09 | PXD051103 | Pride

Salicornia brachiata

Project description:Salicornia brachiata overview

| PRJNA1205433 | ENA

Project description:Salicornia brachiata genome sequencing and assembly

| PRJNA732071 | ENA

Project description:Whole Genome Sequencing of Halophyte Suaeda species Reference Project

| PRJNA573561 | ENA

A multicenter translational biomarker phase II trial of regorafenib in patients with non-resectable pretreated colorectal cancer.

Project description:Primary objectives: The primary objective is to investigate circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS). Primary endpoints: circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS).

| 2533916 | ecrin-mdr-crc

Project description:Plant microbiota of coastal halophyte Salicornia ramossisima

| PRJNA729732 | ENA

Salicornia brachiata isolate:Local isolate

Project description:Molecular insight into salt tolerance mechanism of Salicornia brachiata

| PRJNA1050854 | ENA

Expression profiles of ABA treated bladder and leaf samples of Chenopodium quinoa

Project description:In this project, leaves and EBCs of the halophyte plant Chenopodium quinoa were treated with ABA. The effect of the ABA treatment was analyzed by comparing to non-treated leaves and EBCs.

2022-05-10 | E-MTAB-10419 | biostudies-arrayexpress

Carallia brachiata

Project description:Carallia brachiata Genome sequencing

| PRJNA632974 | ENA

Whole genome SNP array data from myelodysplastic syndromes (MDS) patients

Project description:With the whole genome SNP array information obtained from tumor and matched normal control, we could evaluate the acquired copy number variations (CNVs) and uniparental disomies (UPDs) . Seven MDS patients in a whole genome sequencing project were included in this experiment.

2014-05-22 | GSE57229 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data