Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacterial communities on microplastics

ABSTRACT: Bacterial communities on microplastics Raw sequence reads

PROVIDER: PRJNA564193 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Lignocellulosic degrading bacterial communities

Project description:Lignocellulosic degrading bacterial communities Raw sequence reads

| PRJNA865006 | ENA

Winter airborne bacterial communities

Project description:Winter airborne bacterial communities Raw sequence reads

| PRJNA627456 | ENA

Evaluation of Edaphic Microbial Ammonium Oxidizing Communities during a Yellow Potato Cycle Culture

Project description:This study evaluated the ammonium oxidizing communities (COA) associated with a potato crop (Solanum phureja) rhizosphere soil in the savannah of Bogotá (Colombia) by examining the presence and abundance of amoA enzyme genes and transcripts by qPCR and next-generation sequence analysis. amoA gene abundance could not be quantified by qPCR due to problems inherent in the primers; however, the melting curve analysis detected increased fluorescence for Bacterial communities but not for Archaeal communities. Transcriptome analysis by next-generation sequencing revealed that the majority of reads mapped to ammonium-oxidizing Archaea, suggesting that this activity is primarily governed by the microbial group of the Crenarchaeota phylum. In contrast,a lower number of reads mapped to ammonia-oxidizing bacteria.

2018-08-06 | GSE71824 | GEO

Bacterial communities from seawater microplastics of the Northern Chilean Patagonia

Project description:Bacterial communities from seawater microplastics of the Northern Chilean Patagonia Metagenome

| PRJNA734021 | ENA

water and microplastics

Project description:water and microplastics Raw sequence reads

| PRJNA723058 | ENA

soil and microplastics

Project description:soil and microplastics Raw sequence reads

| PRJNA991721 | ENA

Desert shrub rhizosphere bacterial communities

Project description:Desert shrub rhizosphere bacterial communities Raw sequence reads