Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Wollemia nobilis

ABSTRACT: Wollemia nobilis Genome sequencing and assembly

PROVIDER: PRJNA564454 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10092002_1.fastq.gz	Fastqsanger.gz
	SRR10092003_1.fastq.gz	Fastqsanger.gz
	SRR10444903_1.fastq.gz	Fastqsanger.gz
	SRR10885378_1.fastq.gz	Fastqsanger.gz
	SRR10885385_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 7

Similar Datasets

Wollemia nobilis

Project description:Wollemia nobilis Genome sequencing

| PRJNA260555 | ENA

Wollemia nobilis

Project description:Wollemia nobilis Transcriptome

| PRJNA272373 | ENA

Wollemia nobilis

Project description:Wollemia nobilis Transcriptome or Gene expression

| PRJNA586633 | ENA

Pinna nobilis

Project description:Pinna nobilis Genome sequencing and assembly

| PRJNA645305 | ENA

Lamennaisia nobilis

Project description:Lamennaisia nobilis Genome sequencing and assembly

| PRJNA808686 | ENA

Hypophthalmichthys nobilis

Project description:Hypophthalmichthys nobilis Genome sequencing and assembly

| PRJNA782217 | ENA

Pinna nobilis

Project description:Pinna nobilis Genome sequencing

| PRJNA999583 | ENA

Wollemia nobilis

Project description:Coniferous tree, host to many endophytic fungi

| PRJNA272458 | ENA

Complete Chloroplast Genome of the Wollemi Pine (Wollemia nobilis): Structure and Evolution.

Project description:The Wollemi pine (Wollemia nobilis) is a rare Southern conifer with striking morphological similarity to fossil pines. A small population of W. nobilis was discovered in 1994 in a remote canyon system in the Wollemi National Park (near Sydney, Australia). This population contains fewer than 100 individuals and is critically endangered. Previous genetic studies of the Wollemi pine have investigated its evolutionary relationship with other pines in the family Araucariaceae, and have suggested that the Wollemi pine genome contains little or no variation. However, these studies were performed prior to the widespread use of genome sequencing, and their conclusions were based on a limited fraction of the Wollemi pine genome. In this study, we address this problem by determining the entire sequence of the W. nobilis chloroplast genome. A detailed analysis of the structure of the genome is presented, and the evolution of the genome is inferred by comparison with the chloroplast sequences of other members of the Araucariaceae and the related family Podocarpaceae. Pairwise alignments of whole genome sequences, and the presence of unique pseudogenes, gene duplications and insertions in W. nobilis and Araucariaceae, indicate that the W. nobilis chloroplast genome is most similar to that of its sister taxon Agathis. However, the W. nobilis genome contains an unusually high number of repetitive sequences, and these could be used in future studies to investigate and conserve any remnant genetic diversity in the Wollemi pine.

| S-EPMC4464890 | biostudies-literature

Hypophthalmichthys nobilis cultivar:China

Project description:Hypophthalmichthys nobilis cultivar:China Genome sequencing and assembly

| PRJNA891078 | ENA