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Drosophila melanogaster

ABSTRACT: Individual males from Drosophila melanogaster females heterozygous for c(3)G loss of function mutation

PROVIDER: PRJNA565834 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR10180756_1.fastq.gz	Fastqsanger.gz
	SRR10180756_2.fastq.gz	Fastqsanger.gz
	SRR10180757_1.fastq.gz	Fastqsanger.gz
	SRR10180757_2.fastq.gz	Fastqsanger.gz
	SRR10180758_1.fastq.gz	Fastqsanger.gz

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Drosophila melanogaster

Project description:Individual males from Drosophila melanogaster females homozygous for c(3)G loss of function mutation

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Project description:We replaced the endogenous histones of Drosophila melanogaster with either histones containing an H3K9R mutation or histones containing an H4K16R mutation to interrogate established genome-wide correlations between chromatin state, transcription, and DNA replication timing. We performed total RNA-seq in H4K16R males and females to investigate the role of H4K16 in dosage compensation of the male X chromosome. We found that H4K16 directly promotes hyper-expression of the male X chromosome in Drosophila. To generate replication timing profiles, we performed Repli-seq in HWT males and females, H4K16R males and females, and H3K9R females. We found that H3K9 promotes late replication of the pericentromeric heterochromatin and H4K16 promotes early replication of the male X chromosome.

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Project description:RNA was extracted from adult male and adult female Drosophila melanogaster with reversed sex-chromosome parent-of-origin (e.g. maternal-X/paternal-Y vs. paternal-X/maternal-Y) Parent-of-origin effects were assayed in X/Y males, XY/Y males, and XY/X females. Direct comparisons were made between individuals with the same karyotype (e.g. X/Y males or XY/Y males) incorporating dye-swaps.

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