Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: the raw data of miRNA sequencing of Pyropia haitanensis

PROVIDER: PRJNA573823 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10168700.fastq.gz	Fastqsanger.gz
	SRR10168701.fastq.gz	Fastqsanger.gz
	SRR10168702.fastq.gz	Fastqsanger.gz
	SRR10168703.fastq.gz	Fastqsanger.gz
	SRR10168689.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 15

Similar Datasets

Neoporphyra haitanensis strain:PH-38

Project description:Pyropia haitanensis

| PRJNA283025 | ENA

Project description:Re-sequencing data of Pyropia haitanensis population

| PRJNA954673 | ENA

Project description:Transcriptome of Pyropia haitanensis

| PRJNA670264 | ENA

Project description:Pyropia yezoensis and Pyropia haitanensis transcriptom after chopping

| PRJNA718699 | ENA

Pyropia haitanensis

Project description:Pyropia haitanensis Targeted loci environmental

| PRJNA839642 | ENA

Pyropia haitanensis associated microbiome

Project description:Pyropia haitanensis associated microbiome sequences

| PRJNA726403 | ENA

Neoporphyra haitanensis strain:S-1, S-2

Project description:Pyropia haitanensis Raw sequence reads of conchosporangia maturation

| PRJNA681100 | ENA

Neoporphyra haitanensis cultivar:PH-38

Project description:De novo transcriptome sequencing of Pyropia haitanensis

| PRJNA282903 | ENA

Project description:BSA sequencing results of color characters of Pyropia haitanensis

| PRJNA1045300 | ENA

Identification of the molecular basis of anti-cancer effect of Huaier.

Project description:Intervention type:DRUG. Intervention1:Huaier, Dose form:GRANULES, Route of administration:ORAL, intended dose regimen:20 to 60/day by either bulk or split for 3 months to extended term if necessary. Control intervention1:None. Primary outcome(s): For mRNA libraries, focus on mRNA studies. Data analysis includes sequencing data processing and basic sequencing data quality control, prediction of new transcripts, differential expression analysis of genes. Gene Ontology (GO) and the KEGG pathway database are used for annotation and enrichment analysis of up-regulated genes and down-regulated genes. For small RNA libraries, data analysis includes sequencing data process and sequencing data process QC, small RNA distribution across the genome, rRNA, tRNA, alignment with snRNA and snoRNA, construction of known miRNA expression pattern, prediction New miRNA and Study of their secondary structure Based on the expression pattern of miRNA, we perform not only GO / KEGG annotation and enrichment, but also different expression analysis.. Timepoint:RNA sequencing of 240 blood samples of 80 cases and its analysis, scheduled from June 30, 2022..

| 2612481 | ecrin-mdr-crc

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data