Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Halocynthia roretzi gut transcriptome

PROVIDER: PRJNA596866 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10743032_1.fastq.gz	Fastqsanger.gz
	SRR10743032_2.fastq.gz	Fastqsanger.gz
	SRR10743033_1.fastq.gz	Fastqsanger.gz
	SRR10743033_2.fastq.gz	Fastqsanger.gz
	SRR10743034_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Halocynthia roretzi

Project description:Halocynthia roretzi overview

| PRJNA82135 | ENA

Project description:Halocynthia roretzi stool metagenome

| PRJNA596907 | ENA

Project description:Halocynthia roretzi genome sequencing

| PRJNA482961 | ENA

Spatio-temporal transcriptome maps in the early embryos of Halocynthia roretzi

Project description:The ascidia Halocynthia roretzi (Phylum: Chordata, Subphylum: Tunicata, Class: Ascidiacea) have been used as model species in development biology for over a century. It offers attractive experimental features, including a compact genome, invariant embryonic cell lineages, small embryonic cell number, and translucent embryos, which allow the description of developmental processes with a cellular level of resolution. Staged RNA-seq data has been already deposited in DDBJ (accessiton number DRA005714 and DRA005711). In the present study, we sequenced genome of H. roretzi of a southwestern Japanese population using RNA-Seq data. These RNA-Seq data covers expressions in 8 cell and 110 cell embryos of Animal(A), Vegetal(V) and whole-embryo regions. These genome assembly, transcript assembly, and transcript models are incorporated into the ANISEED (https://www.aniseed.cnrs.fr/) for genome browsing and blast searches. The genome and transcriptome resources will be useful datasets for developmental biology, evolutionary biology and molecular ecology using this model organism.

2024-03-16 | GSE195613 | GEO

Halocynthia roretzi

Project description:Halocynthia roretzi high-throughput sequencing data

| PRJNA957224 | ENA

Project description:Halocynthia roretzi stool 16s rRNA sequencing

| PRJNA596895 | ENA

Spatio-temporal transcriptome maps in the early embryos of Halocynthia roretzi

Project description:Spatio-temporal transcriptome maps in the early embryos of Halocynthia roretzi

| PRJNA801486 | ENA

Halocynthia roretzi strain:Type C

Project description:Halocynthia roretzi strain:Type C Genome sequencing and assembly

| PRJNA481447 | ENA