Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-sequencing experiments comparing P0 control and RXRG/RARb double mutants frontal cortex

ABSTRACT: RNA-sequencing experiments comparing P0 control and RXRG/RARb double mutants frontal cortex

PROVIDER: PRJNA598644 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10816377_1.fastq.gz	Fastqsanger.gz
	SRR10816377_2.fastq.gz	Fastqsanger.gz
	SRR10816378_1.fastq.gz	Fastqsanger.gz
	SRR10816378_2.fastq.gz	Fastqsanger.gz
	SRR10816379_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

RNA-sequencing experiments comparing P0 control and RXRG/RARb double mutants frontal cortex

Project description:To understand the functional significance of RA signaling through the RXRG/RARB heterodimer in the developing cortex, we performed RNA-seq experiments comparing different regions of the P0 mouse frontal cortex (mPFC, secondary motor cortex (MOs)/ primary motor cortex (MOp), and OFC ) in Rarb and Rxrg dKO and WT littermate controls.

2021-01-01 | GSE142851 | GEO

Transcription profiling of human frontal cortices from individuals with Retts syndrome

Project description:Four sets of six microarray experiments were conducted. Six individual RTT frontal cortices were co-hybridized with six individual control frontal cortices. For example, the frontal cortex of patient RTT1 was compared with the occipital cortex of RTT1. Additionally, where the frontal cortex of a RTT sample was compared to the frontal cortex of a control sample, the comparison between the occipital cortices was conducted between the same samples. For example RTT1 frontal cortex vs. Con4 frontal cortex, RTT1 occipital cortex vs. Con4 occipital cortex. Each experiment was repeated and the fluorescent cyanine dyes were reversed.

2010-03-07 | E-MEXP-2588 | biostudies-arrayexpress

P0 wild type tooth and skin

Project description:P0 whole tooth germ cells versus P0 skin cells

2020-06-27 | GSE99360 | GEO

P0-cre marked neural crest cells in murine embryo

Project description:To elucidate the molecular features of craniofacial versus trunk neural crest cells (NCCs), we utilized P0-Cre/Floxed-EGFP mice that specifically label NCCs (Yamauchi et al., 1999 (PMID 10419695)). Craniofacial and trunk regions were isolated from P0-Cre/Floxed-EGFP mouse embryos at embryonic day E12.5, and dissociated cells were analyzed by flow cytometory in regard to the intensity of EGFP. In this study, we performed at least duplicate experiments for each of the four groups (Craniofacial EGFP+, Trunk EGFP+, Craniofacial EGFP-, Trunk EGFP-). Total of 9 samples.

2014-08-01 | E-GEOD-39191 | biostudies-arrayexpress

Single cell RNA-seq data of human hESCs comparing experiments with cDNA library equalization

Project description:Single cell RNA-seq data of human hESCs comparing experiments with cDNA library equalization

| PRJNA658114 | ENA

Piscirickettsia salmonis strain:P0

Project description:Piscirickettsia salmonis strain:P0 Genome sequencing

| PRJNA602937 | ENA

Transcription profiling of mouse NeuroD1 knockout pineal glands vs 129 wild types at P0

Project description:This study determines pineal gland gene expression levels in the NeuroD1 knockout mouse at postnatal day zero. Comparison was performed against pineal gland gene expression levels in 129 wildtype mice also disected at P0. Experiment Overall Design: Wildype 129 mice served as the reference in comparing the levels of gene expression in the NeuroD1 transgenic animals. Experiment Overall Design: 3 pineal glands were disected at P0 during the daytime and pooled for each sample. Experiment Overall Design: 3 separate biological samplings were performed. Experiment Overall Design: Triplicate arrays were run for wildtype and the homozygous animals.

2008-06-14 | E-GEOD-6030 | biostudies-arrayexpress

Circular RNA sequencing of P0 and P2 generation chondrocytes

Project description:Purpose: Circular RNA sequencing was used to find out differentially expressed CircRNAs between P0 generation samples and P2 generation samples. Method: chondrocyte CircRNAs profiles of P0 generation samples and P2 generation samples were analyzed.

2023-08-02 | GSE236856 | GEO

RNA seq of femur and humerus bone tissues from Prx1cre driven Piezo1/2 mutant pups at the age of P0

Project description:The Prx1cre driven Piezo1/2 knockout mice showed bone fractures caused by reduced bone formation. In order to understand the underlying mechanism, we performed RNA seq experiments using total RNA from the bone tissue of control and Piezo1/2 mutant P0 pups.

2020-04-06 | GSE139121 | GEO

RNA-seq of postnatal day 0 (P0) wild-type and Satb2-/- cortices

Project description:The goal of the study was to compare gene expression of P0 wild-type and P0 Satb2-/- cortices. Total RNAs were isolated from P0 cortices dissected from wild-type and Satb2-/- mice (n=3 for each genotype), following Qiagen RNAeasy kit instruction.Sequence libraries were made following Illumina RNA TruSeq library preparation guide.The libaries were pair-end sequenced (50nt per end). Differentially expressed genes were identified by DESEQ.

2015-09-08 | GSE68911 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data