Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-Seq in Drosophila melanogaster S2 cells

ABSTRACT: RNA-Seq in Drosophila melanogaster S2 cells

PROVIDER: PRJNA606761 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11089002.fastq.gz	Fastqsanger.gz
	SRR11089003.fastq.gz	Fastqsanger.gz
	SRR11089004.fastq.gz	Fastqsanger.gz
	SRR11089005.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Ecd protein interactome in Drosophila melanogaster S2 cells

Project description:Identification of the interaction partners of the protein ecdysoneless (Ecd) in Drosophila melanogaster S2 cells as well as profiling of the changes in binding for mutant, truncated Ecd del34 protein.

2021-09-09 | PXD019838 | Pride

DRIP-seq, Drosophila melanogaster, OregonR 2-6H and 10-14H embryos and S2 cells

Project description:This study idenfied RNA:DNA hybrids in Drosophila melanogaster embryos and S2 cells

2020-02-03 | GSE127329 | GEO

Drosophila melanogaster S2-GMR cells, second biological replicate

2009-01-22 | GSE14488 | GEO

Genome wide distribution of dH1K27me2 in Wild Type Drosophila melanogaster S2 cells

Project description:Genome wide distribution of dH1K27me2 in Wild Type Drosophila melanogaster S2 cells

2022-08-02 | GSE167018 | GEO

Drosophila melanogaster strain:S2 cells

Project description:Drosophila melanogaster strain:S2 cells Targeted Locus (Loci)

| PRJNA271521 | ENA

Drosophila melanogaster strain:S2 cells

Project description:Drosophila melanogaster strain:S2 cells Transcriptome or Gene expression

| PRJNA251585 | ENA

Genome wide distribution of gammaH2AvD in Wild Type and RNAi dH1 Drosophila melanogaster S2 cells

Project description:Genome wide distribution of gammaH2AvD in Wild Type and RNAi dH1 Drosophila melanogaster S2 cells

2020-07-01 | GSE76912 | GEO

Drosophila melanogaster S2-GMR cells, second biological replicate

Project description:High-throughput sequencing of Drosophila melanogaster small RNAs from S2 cells. total RNA, ~18-26nt RNAs isolated using PAGE, ligation to adapters requires 5' monophosphate and 3' OH For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf Small RNAs were sequenced from D. melanogaster S2 cells obtained from Gerald Rubin's lab. Raw sequences were clipped by 3' linker sequences recognition, and select clipped sequences longer than 18 nt.

2009-01-22 | E-GEOD-14488 | biostudies-arrayexpress

RNA-Seq in Drosophila melanogaster S2 cells

Project description:RNA-Seq procedure was used for analysis of expression in S2 cells.

2020-12-31 | GSE145320 | GEO

RNA-Seq on libraries made from serial dilutions of Drosophila melanogaster S2 cell mRNA and ERCC external RNA controls

Project description:RNA-Seq on libraries made from serial dilutions of mRNA from Drosophila melanogaster S2 cell and the External RNA Controls Consortium (ERCC) external RNA controls. We evaluated performance of RNA-Seq by serially diluting a complex pool of known synthetic PolyA+ mRNAs from the External RNA Controls Consortium (ERCC) and PolyA+ mRNA from Drosophila S2 cells. ERCC mRNAs were obtained under Phase V testing from the National Institutes of Standards and Technology (NIST). The ERCC pool contained 96 species of mRNA of various lengths and GC content covering a 2^20 concentration range. Libraries were constructed with 100ng to 10pg of input mRNA. Our data shows an outstanding linear fit between RNA-Seq read density and known input amounts.

2010-04-19 | GSE20555 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data