Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Evaluating the microbiome of industrial hemp

PROVIDER: PRJNA607742 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11119800_1.fastq.gz	Fastqsanger.gz
	SRR11119800_2.fastq.gz	Fastqsanger.gz
	SRR11119900_1.fastq.gz	Fastqsanger.gz
	SRR11119900_2.fastq.gz	Fastqsanger.gz
	SRR11120000_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 600

Similar Datasets

Fungi

Project description:Fungal Microbiome of Industrial Hemp

| PRJNA991154 | ENA

Bacteria

Project description:Bacterial microbiome of Industrial Hemp

| PRJNA991126 | ENA

Project description:Microbiome of industrial hemp (Cannabis sativa L.) in field-retted fiber production

| PRJNA494847 | ENA

Whole genome-wide expression profiles of hemp (Cannabis sativa L.) in response to drought stress

Project description:Drought stress is the main environmental factor influencing hemp growth and yield. However, little is known about the response mechanism of hemp to drought stress. A total of 44.10 M tags and 8.91G bases were sequenced in the control hemp (CK) and drought stress hemp (DS) libraries. A total of 1292 differentially expressed genes (DEGs), including 883 up-regulated genes and 409 down-regulated genes, were identified. These results may contribute toward improving our understanding about the drought stress regulatory mechanism of hemp, and improving its drought tolerance ability.

2017-04-22 | GSE56964 | GEO

Protein Expression Changes in Response to Potassium Deficiency Stress of Industrial Hemp Plants Using SWATH Technology

Project description:Protein Expression Changes in Response to Potassium Deficiency Stress of Industrial Hemp Plants Using SWATH Technology

2021-07-24 | PXD027555 |

Protein Expression Changes in Response to different light quality of Industrial Hemp Plants Using DIA Technology

Project description:Protein Expression Changes in Response to different light quality of Industrial Hemp Plants Using DIA Technology

2022-11-01 | PXD037879 |

Project description:Genotype data for F2 industrial hemp mapping population

| PRJNA723060 | ENA

Whole genome-wide expression profiles of hemp (Cannabis sativa L.) in response to drought stress

2017-04-22 | E-GEOD-56964 | biostudies-arrayexpress

Project description:Rhizosphere microorganisms of Industrial hemp in a passage culture experiment

| PRJNA1031791 | ENA

Transcriptomic and metabolomic analyses reveal the differential accumulation of phenylpropanoids and terpenoids in hemp autotetraploid and its diploid progenitor

Project description:<h4>Background</h4>Cannabis sativa, a dioecious plant that has been cultivated worldwide for thousands of years, is known for its secondary metabolites, especially cannabinoids, which possess several medicinal effects. In this study, we investigated the autopolyploidization effects on the biosynthesis and accumulation of these metabolites, transcriptomic and metabolomic analyses were performed to explore the gene expression and metabolic variations in industrial hemp autotetraploids and their diploid progenitors.<h4>Results</h4>Through these analyses, we obtained 1,663 differentially expressed metabolites and 1,103 differentially expressed genes. Integrative analysis revealed that phenylpropanoid and terpenoid biosynthesis were regulated by polyploidization. No substantial differences were found in the cannabidiol or tetrahydrocannabinol content between tetraploids and diploids. Following polyploidization, some transcription factors, including nine bHLH and eight MYB transcription factors, affected the metabolic biosynthesis as regulators. Additionally, several pivotal catalytic genes, such as flavonol synthase/flavanone 3-hydroxylase, related to the phenylpropanoid metabolic pathway, were identified as being modulated by polyploidization.<h4>Conclusions</h4>This study enhances the overall understanding of the impact of autopolyploidization in C. sativa and the findings may encourage the application of polyploid breeding for increasing the content of important secondary metabolites in industrial hemp.

2023-09-21 | MTBLS6032 | MetaboLights

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data