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ABSTRACT: Transcriptome sequencing and metabolome analysis of food habits domestication from live prey fish to artificial diets in mandarin fish (Siniperca chuatsi)

PROVIDER: PRJNA613186 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR11342706_1.fastq.gz	Fastqsanger.gz
	SRR11342706_2.fastq.gz	Fastqsanger.gz
	SRR11342707_1.fastq.gz	Fastqsanger.gz
	SRR11342707_2.fastq.gz	Fastqsanger.gz
	SRR11342708_1.fastq.gz	Fastqsanger.gz

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The determination mechanisms of specialized food habit (live prey fish) in mandarin fish

Project description:Mandarin fish Siniperca chuatsi (Basilewsky) (Percichthyidae), as a demersal piscivore, has very specialized feeding habits, for as soon as they start feeding the fry of this fish feed solely on fry of other fish species. In rearing conditions, mandarin fish has been found to accept live prey fish only, and refuse dead prey fish or artificial diets, very little is currently known about the molecular mechanisms of multiple genes which cover different pathways influencing the specialized food habit, such as live prey. We performed transcriptome comparisons between dead prey fish feeders and nonfeeders in mandarin fish. The determination mechanisms of specialized food habit (live prey fish) in mandarin fish could provide some instructions for research of food habit in animals, including mammals.

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Project description:Whole-genome resequencing of mandarin fish (Siniperca chuatsi)

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Project description:RNA-seq of mandarin fish (Siniperca chuatsi) larvae

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Project description:ATAC-seq of mandarin fish (Siniperca chuatsi): adult liver

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proteom of pathogenetic and resistant mandarin fish (Siniperca chuatsi) infected with ISKNV

Project description:Mandarin fish (Siniperca chuatsi) has become one of the most commercially important freshwater aquaculture species in China because of its fast growth and high nutritional value. Here, the proteome of the spleen of pathogenetic and resistant mandarin fish on the 8th day after ISKNV infection were analyzed using Illumina NovaSeq 6000 and isobaric tag for relative and absolute quantitation. The spleen tissue of the control group (C), resistant group (K), and pathogenetic group (B) were collected at 8 dpc.

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Project description:Whole-genome resequencing in five populations of Mandarin Fish (Siniperca chuatsi)

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Project description:The determination mechanisms of specialized food habit (live prey fish) in mandarin fish.

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Project description:Comparative analysis of the gut microbiota of Mandarin fish (Siniperca chuatsi) feeding on compound diets and live baits

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