Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Inimicus japonicus breed:devil stinger

ABSTRACT: Inimicus japonicus breed:devil stinger Genome sequencing

PROVIDER: PRJNA625612 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Inimicus japonicus

Project description:Inimicus japonicus overview

| PRJNA672762 | ENA

Aedes japonicus breed:Narita

Project description:Aedes japonicus breed:Narita Genome sequencing and assembly

| PRJNA1085103 | ENA

The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer (small RNA sequencing)

Project description:The Tasmanian devil, a marsupial carnivore, is endangered due to the emergence of a clonally transmissible cancer known as Devil Facial Tumor Disease (DFTD). This fatal cancer is clonally derived and is an allograft transmitted between devils by biting. We performed a large-scale genetic analysis of DFTD with microsatellite genotyping, mitochondrial genome analysis, as well as deep sequencing of the DFTD transcriptome and miRNAs. These studies confirm that DFTD is a monophyletic clonally transmissible tumor, and suggest that the disease is of Schwann cell origin. On the basis of these results we have generated a diagnostic marker for DFTD, and identify a suite of genes of relevance to DFTD pathology and transmission. We provide a genomic dataset for the Tasmanian devil, which is applicable to cancer diagnosis, disease evolution and conservation biology. This submission contains only small RNA sequence data from this study. Small RNA (18 - 24 nt) sequences from 15 Tasmanian devil (Sarcophilus harrisii) tissue samples

2010-01-01 | E-GEOD-18352 | biostudies-arrayexpress

The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer (small RNA sequencing)

2010-01-01 | GSE18352 | GEO

Apostichopus japonicus breed:domesticated

Project description:Apostichopus japonicus breed:domesticated Transcriptome or Gene expression

| PRJNA262477 | ENA

Argyrosomus japonicus breed:Dusky Kob

Project description:Argyrosomus japonicus breed:Dusky Kob Raw sequence reads

| PRJNA1033436 | ENA

Methylome of Lotus japonicus accession 'Gifu'

Project description:Whole genome DNA methylation data for the the Lotus japonicus accession 'Gifu'

2016-12-01 | GSE73069 | GEO

Apostichopus japonicus circumoral nerve ring LC-MS/MS

Project description:The objective of this study was to perform a detailed analysis of neuropeptides in A. japonicus by sequencing the transcriptome of neural tissue (circumoral nerve ring; CNR) and combining analysis of these sequence data with mass spectroscopic analysis of CNR extracts so that the structure of mature neuropeptides could be determined. Collectively, these data provide an important molecular basis for investigation of the physiological roles of neuropeptides in A. japonicus and other sea cucumber species.

2019-06-25 | PXD013818 | Pride

small RNA discovery in fission yeast Schizosaccharomyces japonicus

Project description:We used massively parallel sequencing to discover and characterize small RNAs (sRNAs) from fission yeast Schizosaccharomyces japonicus. We found that, unlike in related S. pombe, a substantial fraction of sRNAs maps to transposons, both telomeric and centromeric. small RNA library from total RNA isolations from Schizosaccharomyces japonicus

2012-07-26 | E-GEOD-26902 | biostudies-arrayexpress

small RNA discovery in fission yeast Schizosaccharomyces japonicus

2012-07-26 | GSE26902 | GEO