Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Methylome profile of ovarian tissue of third generation PCOS-like mice versus control animals

ABSTRACT: Methylome profile of ovarian tissue of third generation PCOS-like mice versus control animals

PROVIDER: PRJNA625940 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11561615.fastq.gz	Fastqsanger.gz
	SRR11561616.fastq.gz	Fastqsanger.gz
	SRR11561617.fastq.gz	Fastqsanger.gz
	SRR11561618.fastq.gz	Fastqsanger.gz
	SRR11561619.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 11

Similar Datasets

Methylome profile of ovarian tissue of third generation PCOS-like mice versus control animals

Project description:The aim of this study is to investigate possible differences in methylated regions between ovarian tissue of third generation PCOS-like (PAMH F3) mice versus control animals (CNTR)

2021-01-14 | GSE148838 | GEO

Ovarian tissue of third generation PCOS-like mice versus control animals

Project description:Ovarian tissue of third generation PCOS-like mice versus control animals

| PRJNA625942 | ENA

Transcriptomic profile of ovarian tissue of third generation PCOS-like mice versus control animals

Project description:The aim of this study is to investigate ovarian transcriptomic changes by RNA-seq between 2 experimental groups, control (CNTR) and the third generation of PCOS-like mice (PAMH F3).

2021-01-14 | GSE147412 | GEO

Transcriptomic profile of ovarian tissue of third generation PCOS-like mice versus control animals

Project description:Transcriptomic profile of ovarian tissue of third generation PCOS-like mice versus control animals

| PRJNA614506 | ENA

Ovarian tissue of third generation PCOS-like mice versus control animals

Project description:This SuperSeries is composed of the SubSeries listed below.

2021-01-14 | GSE148839 | GEO

DNA methylation profiling of polycystic ovarian syndrome (PCOS)

Project description:Genome-wide DNA methylation analysis on PCOS using Illumina HumanMethylation 450K BeadChips in 30 PCOS patients and 30 healthy controls Case-control design

2016-08-22 | E-GEOD-80468 | biostudies-arrayexpress

DNA methylation profiling of polycystic ovarian syndrome (PCOS)

Project description:Genome-wide DNA methylation analysis on PCOS using Illumina HumanMethylation 450K BeadChips in 30 PCOS patients and 30 healthy controls

2016-08-22 | GSE80468 | GEO

RRBS, RNA-seq of placenta in women with PCOS and RNA-seq of hippocampus and hypothalamus in femal rats born to PCOS rats.

Project description:Polycystic ovarian syndrome (PCOS) is characterized by hyperandrogenism, irregular ovulation and polycystic ovaries. In the present study, we utilized integrated analysis of whole transcriptome and DNA methylome by reduced representation bisulfite sequencing (RRBS) and RNA sequencing (RNA-seq) of the fetal side of placenta in women with PCOS. A cluster of neural function related genes, such as LIN7A and MAP1B, were identified with integrative analysis of methylome and transcriptome. Inflammatory disease and response process were spotlighted with GO enrichments analysis of differentially transcriptional gene cluster in PCOS, and the cellular growth and the development and function of nervous and endocrine system were also closely related to PCOS. With respect to neural function, the enriched GO terms in differential expressed gene cluster of PCOS group involved brain development, the proliferation and differentiation of neural precursor cell, neuron and neuroblast. Consistently, the enriched GO terms in differential methylated gene cluster of PCOS group were associated with neuropeptide and synaptic transmission, as well as cognition and learning or memory. As the gene expression changes in hypothalamus and hippocampus probably result in long standing neurobehavioural consequences in rodents, we conducted a global analysis of transcriptomic data of F1 pubertal female rats born to PCOS rats.

2020-08-12 | GSE154274 | GEO

miRNAs expression profile of the cumulus cell samples with PCOS and non-PCOS

Project description:To reveal microRNAs expression differences in cumulus cells between polycystic ovary syndrome (PCOS) and non-PCOS women. miRNAs expression profile of the cumulus cell samples with PCOS and non-PCOS were determined by Affymetrix miRNA 2.0. Six pooled RNAs from CC samples (three PCOS and three non-PCOS pooled RNAs) were separately analyzed on 6 GeneChip miRNA 2.0 Array (miRBase V15)

2015-04-28 | E-GEOD-68285 | biostudies-arrayexpress

Expression profiles of human cumulus cells from patients with PCOS and non-PCOS

Project description:To reveal mRNAs expression differences in cumulus cells between polycystic ovary syndrome (PCOS) and non-PCOS women. mRNAs expression profile of the cumulus cell samples with PCOS and non-PCOS were determined by Illumina Novaseq 6000.

2024-10-30 | GSE277906 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data