Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: eDNA metabarcoding as a tool for estuary monitoring

PROVIDER: PRJNA627491 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11624800_1.fastq.gz	Fastqsanger.gz
	SRR11624800_2.fastq.gz	Fastqsanger.gz
	SRR11624900_1.fastq.gz	Fastqsanger.gz
	SRR11624900_2.fastq.gz	Fastqsanger.gz
	SRR11625000_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 576

Similar Datasets

Towards functional profiling for eDNA based monitoring in coastal environments: a comparison of three approaches

Project description:Monitoring microbial communities can aid in understanding the state of these habitats. Environmental DNA (eDNA) techniques provide efficient and comprehensive monitoring by capturing broader diversity. Besides structural profiling, eDNA methods allow the study of functional profiles, encompassing the genes within the microbial community. In this study, three methodologies were compared for functional profiling of microbial communities in estuarine and coastal sites in the Bay of Biscay. The methodologies included inference from 16S metabarcoding data using Tax4Fun, GeoChip microarrays, and shotgun metagenomics.

2024-04-14 | E-MTAB-13075 | biostudies-arrayexpress

Project description:Coastal Lagoon monitoring through eDNA Metabarcoding

| PRJNA836411 | ENA

Padarn eDNA: annual time series with eDNA metabarcoding.

Project description:Biodiversity monitoring of a lake ecosystem through eDNA metabarcoding

| PRJEB13009 | ENA

Project description:eDNA metabarcoding as a biomonitoring tool for marine protected areas

| PRJNA681428 | ENA

Project description:Spatio-temporal monitoring of lake fish spawning activity using eDNA metabarcoding

| PRJNA770176 | ENA

Project description:eDNA metabarcoding of different ciliate marker genes for salmon farm monitoring

| PRJNA477545 | ENA