Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Acidithiobacillus concretivorus strain:ATCC 19703

ABSTRACT: Acidithiobacillus concretivorus strain:ATCC 19703 Genome sequencing and assembly

PROVIDER: PRJNA628530 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Acidithiobacillus thiooxidans strain:ATCC 21835

Project description:Acidithiobacillus thiooxidans strain:ATCC 21835 Genome sequencing and assembly

| PRJNA622789 | ENA

Acidithiobacillus thiooxidans strain:ATCC 8085

Project description:Acidithiobacillus thiooxidans strain:ATCC 8085 Genome sequencing and assembly

| PRJNA623943 | ENA

Acidithiobacillus thiooxidans strain:ATCC 15494

Project description:Acidithiobacillus thiooxidans strain:ATCC 15494 Genome sequencing and assembly

| PRJNA623949 | ENA

Acidithiobacillus ferridurans strain:ATCC 33020

Project description:Acidithiobacillus ferridurans strain:ATCC 33020 Genome sequencing and assembly

| PRJNA623800 | ENA

Acidithiobacillus thiooxidans ATCC 19377

Project description:Acidithiobacillus thiooxidans ATCC 19377 genome sequencing

| PRJNA36587 | ENA

Acidithiobacillus ferrooxidans ATCC 23270

Project description:Acidithiobacillus ferrooxidans ATCC 23270 Genome sequencing

| PRJNA1023499 | ENA

Acidithiobacillus thiooxidans ATCC 19377

Project description:Acidithiobacillus thiooxidans ATCC 19377 Genome sequencing

| PRJNA577769 | ENA

Acidithiobacillus caldus ATCC 51756

Project description:Acidithiobacillus caldus ATCC 51756 genome sequencing

| PRJNA36585 | ENA

Acidithiobacillus caldus ATCC 51756 strain:DSM 8584

Project description:Acidithiobacillus caldus ATCC 51756 strain:DSM 8584 Genome sequencing and assembly

| PRJNA612091 | ENA

Genome-wide transcriptome profiling of Acidithiobacillus ferrooxidans ATCC 23270 in response to the cyc2 knockout

Project description:The outer-membrane c-type cytochrome Cyc2 is generally considered to be the initial electron acceptor in iron respiratory chain of Acidithiobacillus ferrooxidans ATCC 23270, a model microorganism in acidophilic bioleaching environment. In our work, however, the knockout of cyc2 did not result in impaired Fe(II) consumption or growth capacity. To screen the potential genes for alternative initial electron acceptors other than Cyc2, RNA-Seq was employed to compare global gene expressions in the A. ferrooxidans ATCC 23270 wild type and the Δcyc2 mutant grown on Fe(II) or switched energy source from S0 to Fe(II). The data focused on 29 up-regulated and 19 down-regulated genes in the mutant under both conditions, among which AFE_1428 was the most highest one. in-silico analysis also suggested that the product of AFE_1428 might act as an alternative initial electron acceptor when Cyc2 was absent, which needs to be further validated.

2022-04-26 | GSE124570 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data