Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Salmonella enterica

ABSTRACT: Kansas State University Food Science Institute - Salmonella enterica

PROVIDER: PRJNA628951 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR10050104_1.fastq.gz	Fastqsanger.gz
	SRR10050104_2.fastq.gz	Fastqsanger.gz
	SRR10051109_1.fastq.gz	Fastqsanger.gz
	SRR10051109_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 61

Similar Datasets

Salmonella enterica

Project description:GenomeTrakr Project: Kansas State University

| PRJNA832232 | ENA

Salmonella enterica

Project description:GenomeTrakr Project: Penn State University | Department of Food Science | Dudley Lab

| PRJNA357723 | ENA

Salmonella enterica

Project description:GenomeTrakr project: KSU - Food Science Institute - Food Microbiology and Food Safety

| PRJNA419416 | ENA

FabR ChIP-chip on Salmonella enterica subsp. enterica serovar Typhimurium SL1344

Project description:FabR ChIP-chip on Salmonella enterica subsp. enterica serovar Typhimurium SL1344 using anti-Myc antibody against strain with chromosomally 9Myc-tagged FabR (IP samples) and wildtype strain (mock IP samples)

2014-12-31 | GSE52877 | GEO

AP-qMS of retron proteins in Salmonella enterica

Project description:We performed affinity purification coupled to quantitative mass spectrometry (AP-qMS) for proteins belonging to retrons of Salmonella enterica. We quantified the proteome of rcaT point mutants in Salmonella enterica. We quantified the proteome of phage P1vir in E. coli.

2022-06-13 | PXD022376 | Pride

Translation landscape of the enteric pathogen Salmonella enterica serova Typhimurium

Project description:Many non-typhoidal serovars of Salmonella such as Salmonella enterica serovar Typhimurium (S. Typhimurium) are the leading cause of food-borne gastroenteritis, resulting in millions of infections each year and sometimes death. Salmonella enterica serovar Typhimurium is the most common non-typhoidal Salmonella strain isolated from patients around the world and is used as a mouse model to study bacterial pathogenesis and host-microbe interactions. Furthermore, S. Typhimurium is an important pathogen in livestock animals including chickens and cattle. S. Typhimurium utilises a multitude of virulence factors to reach and invade host cells and for its intracellular survival. However, little is known about the mechanism of protein synthesis of these virulence factors at the codon level. Here, we performed RNA-seq and ribosome profiling. Ribosome profiling allows the global mapping of translating ribosomes on the transcriptome and therefore provides direct measure of protein synthesis.

2023-04-01 | E-MTAB-8808 | biostudies-arrayexpress

Dendritic cells infected with Salmonella enterica

Project description:Salmonella enterica causes serious global burden of morbidity and mortality and is a major cause of infant bacteremia in sub Saharan Africa. Diseases caused by Salmonella are treatable with antibiotics but successful antibiotic treatment has become difficult due to antimicrobial resistance. An effective vaccine together with public health effort may therefore be a better strategy to control these infections. Protective immunity against Salmonella depends primarily on T cell-mediated immune responses and therefore identifying relevant T cell antigens is necessary for Salmonella vaccine development. Our laboratory has used an immunoproteomics approach to identify Chlamydia T cell antigens that exhibited significant protection against Chlamydia infection in mice. In this study, we infected murine bone marrow derived dendritic cells from C57BL/6 mice with Salmonella enterica strain SL1344 followed by isolation of MHC class I and II- molecules and elution of bound peptides. The sequences of the peptides were then identified using tandem mass spectrometry. We identified 87 MHC class II and 23 MHC class I Salmonella derived peptides. Four of 12 peptides stimulated IFN-? production by CD4 T cells from the spleens of mice with persistent Salmonella infection. These antigens will be useful for Salmonella immunobiology research and are potential Salmonella vaccine candidates.

2016-12-14 | PXD004451 | Pride

Thermal proteome profiling of Salmonella enterica infection

Project description:We performed two dimensional thermal proteome profiling (2D-TPP) of the infection time course of Salmonella enterica.

2024-08-08 | PXD043344 | Pride

Expression analysis of Salmonella enterica serovar Typhimurium 14028 delta GidA mutant

Project description:Investigation of whole genome gene expression level changes in a Salmonella enterica serovar Typhimurium 14028 delta GidA mutant The mutant described in this study is further analyzed in Shippy, D. C., N. M. Eakley, P. N. Bochsler, and A. A. Fadl. 2011. Biological and virulence characteristics of Salmonella enterica serovar Typhimurium following deletion of glucose-inhibited division (gidA) gene. Microb Pathog.

2011-07-20 | GSE30787 | GEO

Space of Salmonella enterica Proteomic

Project description:The effects of space environment on the of Salmonella enterica protemic production

2018-11-09 | PXD011651 |