Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Concrete cylinder series

PROVIDER: PRJNA629592 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11657900_1.fastq.gz	Fastqsanger.gz
	SRR11657900_2.fastq.gz	Fastqsanger.gz
	SRR11657901_1.fastq.gz	Fastqsanger.gz
	SRR11657901_2.fastq.gz	Fastqsanger.gz
	SRR11657902_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 210

Similar Datasets

concrete metagenome

Project description:Concrete from concrete wall Metagenome

| PRJNA302836 | ENA

Project description:Cylinder canonicus venom gland transcriptome

| PRJNA1222818 | ENA

Cell signalling by microRNA165/6 directs gene dose dependent root cell fate

2010-04-15 | GSE16469 | GEO

Panicum virgatum cultivar:AP13

Project description:Panicum virgatum Cylinder and Shelter Experiements

| PRJNA322529 | ENA

A model of the BEM46 protein mode of action based on whole transcriptome analyzes in Neurospora crassa

Project description:We analyzed gene expression changes in BEM46 knock out and over expression strains of Neurospora crassa in different developmental stages in concrete germinating conidiospores and mycelia.

2021-07-08 | E-MTAB-10612 | biostudies-arrayexpress

terrestrial metagenome

Project description:Corroded concrete Targeted Locus (Loci)

| PRJNA230411 | ENA

Project description:Minsi Trail Concrete Microbiome Data

| PRJNA911763 | ENA

concrete metagenome

Project description:Degraded concrete road bridge metagenome

| PRJNA846790 | ENA

Cell signalling by microRNA165/6 directs gene dose dependent root cell fate

Project description:A key question in developmental biology is how cells exchange positional information for proper patterning during organ development. In plant roots the radial tissue organization is highly conserved with a central vascular cylinder in which two water conducting cell types, protoxylem and metaxylem, are patterned centripetally. We show that this patterning occurs through crosstalk between the vascular cylinder and the surrounding endodermis mediated by cell-to-cell movement of a transcription factor in one direction and microRNAs in the other. SHORT ROOT, produced in the vascular cylinder, moves into the endodermis to activate SCARECROW. Together these transcription factors activate MIR165a and 166b. Endodermally produced miR165/6 then acts to degrade its target mRNAs encoding class III homeodomain-leucine zipper transcription factors in the endodermis and stele periphery. The resulting differential distribution of target mRNA in the vascular cylinder determines xylem cell types in a dosage dependent manner. To investigate the global regulation of SHR and SCR in the root, direct and indirect target genes of SHR and SCR were cross-compared with selected cell type specific expression profiles in the Arabidopsis root published in Birnbaum et al. (2003), Nawy et al. (2005), Lee et al. (2006), and Brady et al. (2007) [pubmed IDs: 14671301, 15937229, 16581911, 17975066]. Furthermore, the mature endodermis specific transcript profiles were generated using a GFP marker line, E30, and used together with published profiles in this comparison.

2010-04-27 | E-GEOD-16469 | biostudies-arrayexpress

Differentially expressed small RNAs in Arabidopsis galls formed by Meloidogyne javanica

Project description:Root-knot nematodes (RKNs) induce inside the vascular cylinder the giant cells (GCs) imbibed into a gall. Gene-repression in early developing GCs could be facilitated by small RNAs (sRNA) as miRNAs. 24nt-sRNAs, rasiRNAs and 21-22nt-sRNAs can also mediate epigenetic mechanisms. Three sRNA libraries from 3dpi galls and three from uninfected root segments were sequenced following Illumina-Solexa technology.

2015-11-19 | GSE71563 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data