Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq in AGS-EBV, shRNA

ABSTRACT: RNA-seq in AGS-EBV, shRNA

PROVIDER: PRJNA631735 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11772160_1.fastq.gz	Fastqsanger.gz
	SRR11772160_2.fastq.gz	Fastqsanger.gz
	SRR11772161_1.fastq.gz	Fastqsanger.gz
	SRR11772161_2.fastq.gz	Fastqsanger.gz
	SRR11772162_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

RNA-seq in AGS-EBV, shRNA

Project description:Gastric cancer is one of the most common cancers worldwide. Epstein-barr virus-associated gastric cancer accounts for about 10% of all gastric cancers. EBV itself expresses a variety of proteins and regulates the expression of host genes. In this study, we examined the knockdown of BC200 and eIF4A3 in AGS-EBV, respectively, and analyzed its effect on host mRNA expression.

2022-05-10 | GSE150299 | GEO

Expression data of EBV-positive and EBV-negative subclones of gastric adenocarcinoma cell line AGS

Project description:Gastric cancer is one of the most common cancers worldwide. Epstein-Barr virus-associated gastric cancer accounts for approximately 10% of all gastric cancers. EBV expresses its own proteins and miRNAs (BART miRNAs) and regulates host gene expression. In this study, we examined the effect of EBV infection on host mRNA expression. Differential gene expression was analyzed between EBV-negative human gastric cancer cell line AGS and EBV-positive human gastric cancer cell line AGS-EBV.

2019-10-14 | GSE135644 | GEO

RNA transcriptome sequencing analysis of AGS cells transfected with MFAP2 shRNA or control shRNA

Project description:An RNA transcriptome sequencing analysis was performed in AGS cells that were transfected with MFAP2 shRNA or control shRNA.

2018-05-23 | GSE114796 | GEO

Homo sapiens strain:AGS and AGS-EBV cell line

Project description:AGS cell line and AGS-EBV cell line Genome sequencing

| PRJNA191915 | ENA

Homo sapiens strain:AGS and AGS-EBV cell line

Project description:AGS cell line and AGS-EBV cell line Transcriptome or Gene expression

| PRJNA192444 | ENA

RNA transcriptome sequencing analysis of AGS cells transfected with MFAP2 shRNA or control shRNA

Project description:RNA transcriptome sequencing analysis of AGS cells transfected with MFAP2 shRNA or control shRNA

| PRJNA472638 | ENA

RNA sequencing data in AGS-BX1 cells treated with C7

Project description:C7 is a novel lytic cycle inducer of Epstein-Barr virus (EBV) in EBV-positive epithelial cells. To analyze the potential signaling pathways that are activated by C7 for induction of EBV lytic cycle, we performed a RNA sequencing to analyze the RNA expression profiles in AGS-BX1 gastric carcinoma cells before and after treatment with C7.

2018-11-21 | GSE122751 | GEO

Expression data of EBV-positive and EBV-negative subclones of gastric adenocarcinoma cell line AGS

Project description:Expression data of EBV-positive and EBV-negative subclones of gastric adenocarcinoma cell line AGS

| PRJNA559542 | ENA

AGS cells infected with Epstein Barr Virus

Project description:Gene expression profile of AGS gastric carcinoma cell line infected in vitro with Epstein-Barr Virus. Some samples also contain are stably transfected with a dominant negative LMP1 construct. 8 total samples. 4 biological replicates of EBV infected cells, 2 biological replicates with EBV infected cells with LMP1DN construct, and 2 biological replicates with EBV infected cells with control vector.

2012-05-07 | E-GEOD-37753 | biostudies-arrayexpress

mRNA, ncRNA-seq and miRNA-seq of AGS cellline and AGS cellline with neutrophil extracellular traps

Project description:ncRNA-seq and miRNA-seq of AGS cellline and AGS cellline with neutrophil extracellular traps

2022-05-18 | GSE188741 | GEO