Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Inheritance Patterns of Leukocyte Gene Expression Under Heat Stress in F1 Hybrids Cattle and Their Parents

ABSTRACT: Inheritance Patterns of Leukocyte Gene Expression Under Heat Stress in F1 Hybrids Cattle and Their Parents

PROVIDER: PRJNA637329 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11926700_1.fastq.gz	Fastqsanger.gz
	SRR11926700_2.fastq.gz	Fastqsanger.gz
	SRR11926701_1.fastq.gz	Fastqsanger.gz
	SRR11926701_2.fastq.gz	Fastqsanger.gz
	SRR11926702_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Inheritance Patterns of Leukocyte Gene Expression Under Heat Stress in F1 Hybrids Cattle and Their Parents

Project description:This study aimed to investigate the heat tolerance and inheritance patterns of leukocyte transcriptomics in F1 hybrid cattle (AN♂ × DR♀) and their parents Red Angus (AN) and Droughtmaster (DR) under heat stress.

2020-06-12 | GSE151817 | GEO

Two Maize Hybrids Seedlings and their parents

Project description:Two Chinese maize hybrids and their parents, were germinated and cultured to three-leaf stage, second seedling leaves from two hybrids and their parents, were used for proteins extraction and analysis by label-free.

2020-05-09 | PXD015819 |

Changes in Gene Expression between Soybean F1 Hybrids and their Parents are Associated with Agronomically Valuable Traits

Project description:Gene expression of the F1 Hybrids between two soybean parents (NMS4-44-329 and N7103) were compared. Changes in gene expression were correlated with agronomic traits.

2017-06-09 | GSE86608 | GEO

Plasticity of Mitochondrial DNA Inheritance and its Impact on Nuclear Gene Transcription in Yeast Hybrids Compared to parents strains

Project description:Plasticity of Mitochondrial DNA Inheritance and its Impact on Nuclear Gene Transcription in Yeast Hybrids Compared to parents strains

| PRJEB37611 | ENA

Expression-inheritance

Project description:Gene expression inheritance in hybrids

| PRJEB7565 | ENA

Transcription profiling of Arabidopsis KZ10/Mrk-0 hybrids and their parents grown at 16C in long day conditions

Project description:KZ10/Mrk-0 F1 hybrids and their parents were grown at 23 degreeC long days for 12 days then shifted to 16 degreeC and harvested after 2 days. Whole rosettes were harvested, and each sample is a pool of ten plants.

2007-07-11 | E-ATMX-25 | biostudies-arrayexpress

Untargeted metabolomic profile of Saccharomyces cerevisiae (F2) hybrids (part II)

Project description:Metabolomic profiles were compiled from oak and wine yeast parents, and their F2 hybrids. Included in this study are extraction controls.

2017-08-22 | ST000870 | MetabolomicsWorkbench

Plasticity of Mitochondrial DNA Inheritance and its Impact on Nuclear Gene Transcription in Yeast Hybrids Compared to parents strains

Project description:Mitochondrial DNA (mtDNA) in budding yeast is biparentally inherited, but colonies rapidly lose one type of parental mtDNA, becoming homoplasmic. Therefore, hybrids between different yeast species possess two homologous nuclear genomes, but only one type of mitochondrial DNA. We hypothesise that the choice of mtDNA retention is influenced by its contribution to hybrid fitness in different environments, and that the allelic expression of the two nuclear sub-genomes is affected by the presence of different mtDNAs in hybrids. Here, we crossed Saccharomyces cerevisiae with S. uvarum under different environmental conditions and examined the plasticity of the retention of mtDNA in each hybrid.

2020-10-26 | E-MTAB-8900 | biostudies-arrayexpress

Increased long-distance interactions related to heterotic expression in Arabidopsis hybrids

Project description:In plants, the genomic structure of hybrids changed compared with their parents. However, the effects of genomic structure changes on heterotic expression in hybrids remain elusive. By comparing interspecific hybrids between Col×C24 and their backcross C24×Col in Arabidopsis with Hi-C analysis, we found that the three-dimensional (3D) chromatin organization had more long-distance interactions relative to parents. The compartment strength related to the increased A-B compartment interactions decreased in hybrids. In the boundaries of topologically associated domains (TADs) like regions in hybrids, the values of Interchromosomal Fraction of Interactions (ICF) and Distal-to-Local [log2] (DLR) were higher than or close to the highest value of their parents. While in the hybrids of CURLY LEAF (clf) mutants, which affects the long-distance interactions, the heterosis phenotype disappeared and the ICF and DLR in hybrids were lower than their parents. In addition, compared with the clf mutant, the differential expressed genes located in TAD boundaries and loop regions in the wild type changed more obviously. In the long-distance interaction and the loop region between WT and clf, there were obvious differences in the functional enrichment for DEGs. The genes with cell cycle and mitotic related process were specifically enriched in clf. By analyzing ChIP-seq data, we found that the enrichment of H3K27me3 were higher in the hybrids in WT, which may lead to more long-distance interactions. Our findings may therefore propose a new epigenetic explanation of the heterotic expression in Arabidopsis hybrids and provide new insights into crop breeding and yield increasing.

2024-03-24 | GSE221446 | GEO

Increased long-distance interactions related to heterotic expression in Arabidopsis hybrids (clf)

2024-03-24 | GSE222132 | GEO