Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Rumen fluid sequencing

PROVIDER: PRJNA637706 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11943700_1.fastq.gz	Fastqsanger.gz
	SRR11943700_2.fastq.gz	Fastqsanger.gz
	SRR11943701_1.fastq.gz	Fastqsanger.gz
	SRR11943701_2.fastq.gz	Fastqsanger.gz
	SRR11943702_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Transcriptome analysis of Escherichia coli O157:H7 EDL933 during rumen fluid exposure using microarrays

Project description:The transcriptome of Escherichia coli K-12 has been widely studied over a variety of conditions for the past decade while such studies involving E. coli O157:H7, its pathogenic cousin, are just now being conducted. To better understand the impact of rumen fluid on E. coli O157:H7, global transcript levels of strain EDL933 cells resuspended in heat clarified rumen fluid for 15 min were compared to cells resuspended in fresh LB using microarrays. Seven independent RNA samples from rumen fluid treated cultures were paired with seven independent RNA samples from control cultures for hybridization to seven two-color microarrays. For three arrays, the control RNA sample was labeled with Cy3 dye and the experimental RNA sample was labeled with Cy5 dye, the dyes were reversed for the other four arrays to overcome dye bias.

2010-12-01 | E-GEOD-16747 | biostudies-arrayexpress

Rumen fluid miRNAome of dry cows transitioned from forage to 65% grain diet

Project description:This study aimed to explore the changes in miRNAome in the rumen fluid during diet transition from forage to high-grain.

2022-02-03 | GSE195757 | GEO

Transcriptome analysis of Escherichia coli O157:H7 EDL933 during rumen fluid exposure using microarrays

2010-12-01 | GSE16747 | GEO

Project description:rumen fluid sequencing

| PRJNA1056260 | ENA

Project description:rumen fluid samples Sequencing

| PRJNA687122 | ENA

bovine gut metagenome

Project description:RUMEN FLUID Genome sequencing

| PRJNA311107 | ENA

bovine gut metagenome

Project description:rumen fluid Genome sequencing

| PRJNA311112 | ENA

bovine gut metagenome

Project description:Rumen fluid Genome sequencing

| PRJNA311108 | ENA

bovine gut metagenome

Project description:Rumen Fluid Genome sequencing

| PRJNA311111 | ENA

Transcriptome differences in the rumen of beef steers with variation in feed intake and gain

Project description:RNA sequencing (RNA-Seq) was performed on rumen papillae from 16 steers with variation in gain and feed intake. Sixteen rumen papillae samples were sequenced by Cofactor Genomics (St.Louis, MO).

2015-07-22 | E-GEOD-71153 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data