Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Macrobrachium nipponense strain:hepatopancreas

ABSTRACT: Macrobrachium nipponense strain:hepatopancreas Raw sequence reads

PROVIDER: PRJNA639302 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12009469.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Comparative proteomic analysis of hepatopancreas reveals key proteins in regulatory mechanism of ovary maturation of Macrobrachium nipponense

Project description:Hepatopancreas proteomics analyses Macrobrachium nipponense, reveals key proteins in regulatory mechanism of ovary maturation of Macrobrachium nipponense.

2023-05-10 | PXD037141 | Pride

Transcriptome analysis of Macrobrachium nipponense : genes and expression profile from hepatopancreas and muscle

Project description:To identify genes involved in nutrition metabolism of Macrobrachium nipponense, two independent cDNA libraries from hepatopancreas and muscle were constructed through high-throughput next-generation sequencing techniques. A total of 112,548,142 and 90,140,774 high quality reads were generated in the two cDNA libraries, respectively. Clustering and assembly of these reads produced a nonredundant set of 98,560 unique sequences, with an average unigene length of 793 bp. The unigene sequences were subjected to GO, COG and KEGG functional classification. A large number of differentially expressed genes were recovered by comparison of the two tissues. The differentially expressed and their functions were predicted by KEGG pathway mapping. Furthermore, 17,971SSRs and 32,935 high-confidence SNPs were identified in the two EST datasets. This study lays the foundation for further research on gene function analysis in nutrition metabolism of M. nipponense. sample 1: hepatopancreas; sample 2: muscle

2016-03-02 | E-GEOD-78788 | biostudies-arrayexpress

Transcriptome analysis of Macrobrachium nipponense : genes and expression profile from hepatopancreas and muscle

2016-03-02 | GSE78788 | GEO

Macrobrachium nipponense

Project description:Macrobrachium nipponense Raw sequence reads

| PRJNA962267 | ENA

Macrobrachium nipponense

Project description:Macrobrachium nipponense Raw sequence reads

| PRJNA326450 | ENA

Macrobrachium nipponense

Project description:Macrobrachium nipponense Raw sequence reads

| PRJNA343712 | ENA