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Total RNA sequencing of progenies of Col-0 grafted on msh1 Col-0 grafted on dcl2,3,4,msh1 Col-0 grafted on Col-0 in Arabidopsis [msh1_graft_leaf_RNA-seq]

ABSTRACT: Total RNA sequencing of progenies of Col-0 grafted on msh1 Col-0 grafted on dcl2,3,4,msh1 Col-0 grafted on Col-0 in Arabidopsis [msh1_graft_leaf_RNA-seq]

PROVIDER: PRJNA639732 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR12022744_1.fastq.gz	Fastqsanger.gz
	SRR12022744_2.fastq.gz	Fastqsanger.gz
	SRR12022745_1.fastq.gz	Fastqsanger.gz
	SRR12022745_2.fastq.gz	Fastqsanger.gz
	SRR12022746_1.fastq.gz	Fastqsanger.gz

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Total RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; Col-0 grafted on Col-0 in Arabidopsis [msh1_graft_leaf_RNA-seq]

2020-09-20 | GSE152565 | GEO

Bisulfite (methylome) sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; Col-0 grafted on Col-0; msh1 mutant; dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_BS-seq]

Project description:Col-0 floral stem was grafted on the msh1 mutant (Col-0/msh1); on the dcl2,3,4,msh1 quadruple mutant (Col-0/dcl2,3,4,msh1); on Col-0 (Col-0/Col-0). Seeds were collected from the grafted Col-0 scion after grafts were established. Seed coming from the graft then were grown on the peat mix, leaf tissue was collected at the bolting and used for the bisulfite sequencing (methylome). Tissue from the msh1 mutant and dcl2,3,4,msh1 quadruple mutants used as rootstocks was similarly collected at the bolting stage and used for the bisulfite sequencing.

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Project description:Col-0 floral stem was grafted on the msh1 mutant (Col-0/msh1) and on the dcl2,3,4,msh1 quadruple mutant (Col-0/dcl2,3,4,msh1). Seeds were collected from the grafted Col-0 scion after grafts were established. Seed coming from the graft then were grown on 0.5M MS growth medium and root tissue was collected after 12 days and used for the RNA sequencing.

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Small RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; msh1 mutant; dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_sRNA-seq]

Project description:Col-0 floral stem was grafted on the msh1 mutant (Col-0/msh1); on the dcl2,3,4,msh1 quadruple mutant (Col-0/dcl2,3,4,msh1). Seeds were collected from the grafted Col-0 scion after grafts were established. Seed coming from the graft then were grown on the peat mix, leaf tissue was collected at the bolting and used for the small RNA sequencing. Tissue from the msh1 mutant and dcl2,3,4,msh1 quadruple mutants used as rootstocks was similarly collected at the bolting stage and used for the small RNA sequencing.

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RNA sequencing of progenies of Col-0 grafted on msh1 Col-0 grafted on dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_root_RNA-seq]

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Small RNA sequencing of progenies of Col-0 grafted on msh1 Col-0 grafted on dcl2,3,4,msh1 msh1 mutant dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_sRNA-seq]

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