Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Sheep skin transcriptome

PROVIDER: PRJNA639853 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12026578_1.fastq.gz	Fastqsanger.gz
	SRR12026578_2.fastq.gz	Fastqsanger.gz
	SRR12026579_1.fastq.gz	Fastqsanger.gz
	SRR12026579_2.fastq.gz	Fastqsanger.gz
	SRR12026580_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

E-GEOD-56643

Project description:RNA-seq of coding RNA of seven tissues from a single female Texel sheep and skin tissue from a Gansu alpine fine wool sheep

2015-09-07 | E-GEOD-56643 | ExpressionAtlas

E-CURD-39

Project description:Grape skin transcriptome to reveal genes related with resveratrol accumulation

2020-07-20 | E-CURD-39 | ExpressionAtlas

Project description:Sheep skin transcriptome

| PRJNA1051332 | ENA

E-MTAB-3838

Project description:Sheep Tissue Atlas

2016-04-07 | E-MTAB-3838 | ExpressionAtlas

Project description:Transcriptome of sheep scapular skin

| PRJNA765722 | ENA

Transcriptome sequencing of Ovis aries

Project description:We have completed the high quality reference genome for domestic sheep (Oar v3.1) and performed a detailed survey of gene expression across different tissues. RNA-seq data of 7 tissue types from the reference female Texel and skin tissue from a Gansu alpine fine wool sheep were sequenced. Here is the part of the RNA-seq data sequenced in BGI, including 7 tissue types from the reference female Texel and skin type from a Gansu alpine fine wool sheep.

2014-06-06 | E-GEOD-56643 | biostudies-arrayexpress

Exploring the transcriptomic pattern in two kind of sheep skin with remarkable phenotype differences on wool

Project description:We report the application of High throughout sequencing to explore the differences of skin between Super Merino sheep(SM) and Small Tail Han sheep, which have remarkable phenotype differences on wool and hair follicle traits. We analysed the expression data by CLC genomic workbench 9.0 software. We find there are 435 differential expressional genes (DEGs) (127 were up-regulated and 308 were down-regulated) when STH sheep as control group. Some hair follicle KRTs, KAPs genes and hair follicle stem cells marker genes, were up-regulated in SM sheep. However, some of mammalian epidermal development complex (EDC) family genes were up-regulated in STH sheep. The GO and gene network analysis shown high expression genes in SM sheep enriched on type I interferon, lipid/fatty acid synthesis metabolism. This study provide more details in skin which control the development of follicle and wool in sheep.

2017-11-16 | GSE95785 | GEO

Regulatory and epistatic networks unravel the complexity of piebald, a pigmentation phenotype in Merino sheep

Project description:Transcriptional profiling of Ovine skin samples comparing pigmentation samples from piebald and normal Merino sheep All pair comparison of 5 pigmentation samples with dye swaps. Dye swaps were performed with different biological replicates (labelled 1 or 2) NOR - White sample from a normal, non-affected wild-type individual sheep PBB - Black sample from a piebald individual sheep PBW - White sample from a piebald individual sheep RSB - Black sample from a recessive black sheep RSW - White sample from a recissive black sheep taken from the inguinal, non-pigmented area.

2010-09-18 | E-GEOD-24189 | biostudies-arrayexpress

Ovis aries

Project description:sheep skin Transcriptome or Gene expression

| PRJNA174344 | ENA

Ovis aries

Project description:Sheep skin Transcriptome Raw sequence reads

| PRJNA1125045 | ENA