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Gene expression analysis of mulberry (Morus atropurpurea) response to cadmium stress

ABSTRACT: Gene expression analysis of mulberry (Morus atropurpurea) response to cadmium stress

PROVIDER: PRJNA640044 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR12033045.fastq.gz	Fastqsanger.gz
	SRR12033046.fastq.gz	Fastqsanger.gz
	SRR12033047.fastq.gz	Fastqsanger.gz
	SRR12033048.fastq.gz	Fastqsanger.gz
	SRR12033049.fastq.gz	Fastqsanger.gz

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Gene expression analysis of mulberry (Morus atropurpurea) response to cadmium stress

Project description:Mulberry (Morus atropurpurea) is an important economic woody tree with rapid growth rate and large biomass, which had great potential for heavy metals remediation. To further understand the mechanisms involved in cadmium accumulation and detoxification in mulberry, we carried out a transcriptomic study to get insights into the molecular mechanisms of the mulberry response to cadmium stress using RNA-seq analysis with BGISEQ-500.

2022-06-30 | GSE152672 | GEO

Morus alba var. atropurpurea

Project description:Gene expression analysis of diploid and autotetraploids of Mulberry (Morus atropurpurea)

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Gene expression analysis of Ciboria carunculoides-infected Mulberry (Morus atropurpurea) fruit

Project description:Ciboria carunculoides is a major fungal pathogen that infect of mulberry fruit causing popcorn disease leading extensive damage and productivity loss. In spite of such a major impact, mulberry fruit response to C. carunculoides infection is yet to be witnessed. We carried out a transcriptomic study to get insights into the molecular mechanisms and dynamics of the mulberry fruit response to the C. carunculoides infection using RNA-seq analysis with Illumina HiSeq 2000.

2021-03-01 | GSE111319 | GEO

Gene expression analysis of diploid and autotetraploids of Mulberry (Morus atropurpurea)

Project description:Autotetraploid carries several phenotypic changes with larger leaves and fruit compared to diploid. To analysis of phenotypic changes in mulberry autotetraploids on the transcriptome, we performed RNA-Seq analyses on mulberry leaf samples of diploid and autotetraploids using Illumina HiSEq 2000.

2017-02-09 | GSE70428 | GEO

Gene expression analysis of Ciboria carunculoides-infected Mulberry (Morus atropurpurea) fruit

Project description:Gene expression analysis of Ciboria carunculoides-infected Mulberry (Morus atropurpurea) fruit

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Morus alba var. atropurpurea

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Morus alba var. atropurpurea

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Effects of Morus alba L. (Mulberry) Leaf Extract in Hypercholesterolemic Mice on Suppression of Cholesterol Synthesis

Project description:To investigate effects of intake of mulberry leaf extracts on hypercholesterolemia, we performed gene expression profiling on rat liver by microarray analysis. Microarray analysis revealed that mulberry leaf extracts up-regulated the gene expression involved in suppression of cholesterol synthesis and stimulation of innate-adaptive Immunity. Mice were fed a high-cholesterol diet without/with orally administration of mulberry leaf extracts for 4 weeks. Livers were taken for RNA extraction and hybridization on Agilent microarrays.

2016-07-03 | E-GEOD-65839 | biostudies-arrayexpress

iTRAQ-based quantitative proteomic analysis reveals proteomic changes in leaves of mulberry in response to drought stress

Project description:Mulberry (Morus alba) is a fast-growing perennial woody plant with a long cultivation history in China and a distribution throughout the country. To date, the molecular mechanism of mulberry response to abiotic stress is little known. In the present study, proteomics data were collected from the leaves of the mulberry cultivar Neo-Ichinose (Japan) under drought stress and analyzed. In total, 2871 proteins were quantified, among which 267 proteins were differentially expressed. A Gene Ontology enrichment analysis indicated that the molecular functions of the up-regulated proteins were mainly related to glutathione peroxidase activity, hydrolase activity, oxidoreductase activity, peroxidase activity and antioxidant activity. Protein domain enrichment analysis showed that the most important protein domains were associated with glutathione peroxidase, glycoside hydrolase, and chaperones. Additionally, a functional enrichment analysis demonstrated that the main metabolic pathways of mulberry seedlings in response to drought stress were arachidonic acid metabolism and glutathione metabolism, which were up-regulated, and chlorophyll and porphyrin metabolism and glycerol metabolism, which were down-regulated. Additionally, many proteins related to osmotic adjustment and stress signal transduction were evoked by drought. Taken together, these results suggested that redox control and osmotic adjustment mediated by multiple signaling pathways dominated the drought response of mulberry and that antioxidant proteins and enzymes, especially glutathione peroxidase, played vital roles in the redox rebalance of mulberry under stress.

2022-10-13 | PXD010227 | Pride

Transcriptome analysis of Indian mulberry leaf tissue

Project description:The mian goal of the study was to identify drought responsive genes of Indian mulberry (Morus alba L.) leaf tissue. Drought stress was imposed at whole plant leve; usig gravimetric approach. Leaf tissue was harvested 14 days post drought stress imposition and used for transcriptome analaysis. Two levels of drought stress (100% and 40% soil field capacity) was maintained by controlled irrigation. The leaf tissue was collected, total RNA was isolated converted to cDNA and used for analysis

2021-08-25 | GSE156822 | GEO

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