Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: A national study of extensively drug-resistant tuberculosis.

PROVIDER: PRJNA641236 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12072600_1.fastq.gz	Fastqsanger.gz
	SRR12072600_2.fastq.gz	Fastqsanger.gz
	SRR12072601_1.fastq.gz	Fastqsanger.gz
	SRR12072601_2.fastq.gz	Fastqsanger.gz
	SRR12072602_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 38

Similar Datasets

Mycobacterium tuberculosis clinical isolates in China: extensively drug-resistant tuberculosis vs drug sensitive one

Project description:Transcriptional profiling of mycobacterium tuberculosis clinical isolates in China comparing extensively drug-resistant tuberculosis with drug sensitive one. The same condition experiment. The samples were from the different drug-resistant strains. Only one replicate.

2009-04-04 | E-GEOD-15540 | biostudies-arrayexpress

Mycobacterium tuberculosis clinical isolates in China: extensively drug-resistant tuberculosis vs drug sensitive one

Project description:Transcriptional profiling of mycobacterium tuberculosis clinical isolates in China comparing extensively drug-resistant tuberculosis with drug sensitive one.

2009-04-04 | GSE15540 | GEO

Project description:Extensively Drug-Resistant (XDR) Mycobacterium tuberculosis in Zhejiang, China

| PRJNA392962 | ENA

Mycobacterium tuberculosis strain:NCGM946K2

Project description:Complete genome of Extensively drug-resistant Mycobacterium tuberculosis NCGM946K2

| PRJDB5220 | ENA

Whole Genome Sequence Analysis of Mycobacterium tuberculosis Strains from Patients in Campania Region

Project description:Tuberculosis (TB) is one of the deadliest infectious disorders in the world. To effectively TB manage, an essential step is to gain insight into the lineage of Mycobacterium tuberculosis (MTB) strains and the distribution of drug resistance. Although the Campania region is declared a cluster area for the infection, to contribute to the effort to understand TB evolution and transmission, still poorly known, we have generated a dataset of 159 genomes of MTB strains, from Campania region collected during 2018-2021, obtained from the analysis of whole genome sequence data. The results show that the most frequent MTB lineage is the 4 according for 129 strains (81.11%). Regarding drug resistance, 139 strains (87.4%) were classified as multi susceptible, while the remaining 20 (12.58%) showed drug resistance. Among the drug-resistance strains, 8 were isoniazid-resistant MTB (HR-MTB), 7 were resistant only to one antibiotic (3 were resistant only to ethambutol and 3 isolate to streptomycin while one isolate showed resistance to fluoroquinolones), 4 multidrug-resistant MTB, while only one was classified as pre-extensively drug-resistant MTB (pre-XDR). This dataset expands the existing available knowledge on drug resistance and evolution of MTB, contributing to further TB-related genomics studies to improve the management of TB infection.

2023-11-17 | E-MTAB-13058 | biostudies-arrayexpress

Mycobacterium tuberculosis

Project description:Mycobacterium tuberculosis clinical isolates in China: extensively drug-resistant tuberculosis vs drug sensitive one

| PRJNA115971 | ENA

Mycobacterium tuberculosis OM-V02_005

Project description:Hyper-transmissible extensively drug-resistant Mycobacterium tuberculosis Beijing Strain Analysis

| PRJDB1129 | ENA

Drug resistant tuberculosis study in Latvia

Project description:Drug resistant tuberculosis study in Latvia

| PRJEB59824 | ENA

Mycobacterium tuberculosis KZN 605

Project description:Extensively drug-resistant clinical isolate