Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Deeplex Myc-TB evaluation: DRC survey (Part 2)

PROVIDER: PRJNA643242 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12119500_1.fastq.gz	Fastqsanger.gz
	SRR12119500_2.fastq.gz	Fastqsanger.gz
	SRR12119600_1.fastq.gz	Fastqsanger.gz
	SRR12119600_2.fastq.gz	Fastqsanger.gz
	SRR12119700_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 1494

Similar Datasets

Project description:Deeplex Myc-TB evaluation: DRC survey (Part 1)

| PRJNA643157 | ENA

Project description:Deeplex Myc-TB evaluation: Djibouti

| PRJNA633444 | ENA

Project description:Deeplex Myc-TB evaluation: Limit of detection

| PRJNA633106 | ENA

Project description:Deeplex Myc-TB evaluation: Non-tuberculous mycobacteria (NTM)

| PRJNA633380 | ENA

Project description:Deeplex Myc-Lep evaluation

| PRJNA923280 | ENA

Project description:Deeplex Myc-TB evaluation: Comparison to WGS and pDST

| PRJNA633803 | ENA

Project description:Deeplex Myc-TB evaluation: Comparison to WGS and pDST

| PRJNA649788 | ENA

human sputum metagenome

Project description:2016 National tuberculosis drug resistance survey of DRC: Targeted next generation sequencing performed directly from sputum using Deeplex MycTB assay (Genoscreen, France)

| PRJNA560875 | ENA

Separable functions of Tof1/Timeless in intra-S-checkpoint signalling, replisome stability and DNA topological stress

Project description:The highly conserved Tof1/Timeless proteins minimise replication stress and promote normal DNA replication. They are required to mediate the DNA replication checkpoint (DRC), the stable pausing of forks at protein fork blocks, the coupling of DNA helicase and polymerase functions during replication stress (RS) and the preferential resolution of DNA topological stress ahead of the fork. Here we demonstrate that the roles of the Saccharomyces cerevisiae Timeless protein Tof1 in DRC signalling and resolution of DNA topological stress require distinct N and C terminal regions of the protein, whereas the other functions of Tof1 are closely linked to the stable interaction between Tof1 and its constitutive binding partner Csm3/Tipin. By separating the role of Tof1 in DRC from fork stabilisation and coupling, we show that Tof1 has distinct activities in checkpoint activation and replisome stability to ensure the viable completion of DNA replication following replication stress.

2020-10-08 | GSE144321 | GEO

Expression data of lncRNAs and mRNAs extracted from serum of tuberculosis patients and healthy individuals

Project description:Efforts to eradicate TB are largely threatened by drug-resistant tuberculosis, particularly, multidrug-resistant tuberculosis (MDR-TB). It is imperative to find one or more specific biomarkers for diagnosing MDR-TB earlier and declining the incidence. Growing evidences have showed lncRNAs are widely expressed and take part in the genesis and development of many diseases, including tuberculosis. Therefore, to screen the differential lncRNAs among MDR-TB, drug-sensitive tuberculosis(DS-TB) and healthy controls(HCs) is a good strategy to acquire potential biomarkers for MDR-TB diagnosis and partly describe the mechanism of MDR-TB. Here, the present study aimed to investigate the differential expression profile of lncRNAs in serum among patients with MDR-TB ,DS-TB and HCs using lncRNA microarray

2021-09-10 | GSE183787 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data