Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

PRMT7 regulated chromatin accesibility in myeloid cells [ATAC-Seq]

ABSTRACT: PRMT7 regulated chromatin accesibility in myeloid cells [ATAC-Seq]

PROVIDER: PRJNA643578 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12130209_1.fastq.gz	Fastqsanger.gz
	SRR12130209_2.fastq.gz	Fastqsanger.gz
	SRR12130210_1.fastq.gz	Fastqsanger.gz
	SRR12130210_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

PRMT7 regulated chromatin accesibility in myeloid cells [ATAC-Seq]

Project description:Under inflammatory conditions the extravasation of monocytes into tissues through trans-endothelial migration is a fundamental immunological process underlying innate inflammatory responses across multiple organ systems contributing to tissue injury and the progression of autoimmunity, cardiovascular disease and particularly chronic lung disease. Methylation of protein arginine residues via protein arginine methyltransferases (PRMTs) is a post-translational epigenetic modification implicated in inflammatory responses. How PRMTs, particularly PRMT7, epigenetically regulates monocyte-driven inflammatory response in disease remains unclear. Here, we perform ATAC-seq analysis on an MHS macrophage cell line in which PRMT7 has been disrupted by CRISPR/Cas9 to examine chromatin accessibility regulated by PRMT7.

2022-01-12 | GSE153666 | GEO

Effect of the depletion of RBP33 (Tb927.8.990) on chromatin accesibility in bloodstream Trypanosoma brucei [ATAC-seq]

Project description:Depletion of RBP33 by RNAi does not seem to have profound effects on chromatin accesibility

2022-11-03 | GSE186562 | GEO

Deoxyshikonin-induced chromatin accesibility changes in porcine intestinal epithelial cells

Project description:The objectives of this study is to evaluate the chromatin accesibility changes after deoxyshikonin stimulation in porcine intestinal epithelial cells.

2023-04-09 | GSE228772 | GEO

Chromatin accesibility in mice T-ALL tumors

Project description:Long-range enhancers play an important role in the temporal and spatial control of gene expression and are deregulated in many cancers. Yet, the mechanisms that govern enhancer activity during development and oncogenesis remain poorly understood. In this study we analyze the chromatin accesibility of mice T-ALL tumors.

2018-12-21 | GSE124175 | GEO

Chromatin accesibility in mice T-ALL tumors

Project description:Chromatin accesibility in mice T-ALL tumors

| PRJNA510948 | ENA

Chromatin accesibility in human DP3 thymocytes and T-ALL tumors

2018-12-21 | GSE124223 | GEO

Effect of the depletion of RBP33 (Tb927.8.990) on chromatin accesibility in bloodstream Trypanosoma brucei [ATAC-seq]

Project description:Effect of the depletion of RBP33 (Tb927.8.990) on chromatin accesibility in bloodstream Trypanosoma brucei [ATAC-seq]

| PRJNA774553 | ENA

Chromatin accessibility (ATAC-seq) of human acute leukemias and healthy donors

Project description:ATAC-seq of 79 primary samples obtained from human acute leukemias, namely AML, T-ALL and mixed myeloid/lymphoid leukemias with CpG Island Methylator Phenotype (CIMP). Moreover, ATAC-seq of CD34+ HSPCs from 3 healthy donors are included. ATAC-seq was performed as described (Buenrostro et al., 2013) with a modification in the lysis buffer to reduce mitochondrial DNA contamination. Due to patient confidentiality considerations, the raw data files for this dataset have been deposited to the EGA controlled-access archive under the accession numbers EGAS00001007094 (study); EGAD00001011050 (dataset).

2023-08-31 | E-MTAB-13118 | biostudies-arrayexpress

Chromatin accesibility in human DP3 thymocytes and T-ALL tumors

Project description:Chromatin accesibility in human DP3 thymocytes and T-ALL tumors

| PRJNA511015 | ENA

Deoxyshikonin-induced chromatin accesibility changes in porcine intestinal epithelial cells

Project description:Deoxyshikonin-induced chromatin accesibility changes in porcine intestinal epithelial cells

| PRJNA951452 | ENA