Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Burkholderia guangdongensis strain:DHOM02

ABSTRACT: Burkholderia guangdongensis strain:DHOM02 Genome sequencing and assembly

PROVIDER: PRJNA644343 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Myxococcus guangdongensis strain:K38C18041901

Project description:Myxococcus guangdongensis strain:K38C18041901 Genome sequencing and assembly

| PRJNA792699 | ENA

Magnolia guangdongensis

Project description:Magnolia guangdongensis Genome sequencing and assembly

| PRJNA648464 | ENA

Chiloschista guangdongensis

Project description:Chiloschista guangdongensis Genome sequencing and assembly

| PRJNA1018317 | ENA

Comamonas guangdongensis strain:CCTCC AB2011133

Project description:Comamonas guangdongensis strain:CCTCC AB2011133 Genome sequencing

| PRJNA1142440 | ENA

Magnolia guangdongensis

Project description:Magnolia guangdongensis overview

| PRJNA806257 | ENA

Platanthera zijinensis and Platanthera guangdongensis

Project description:Platanthera zijinensis and Platanthera guangdongensis Genome sequencing and assembly

| PRJNA739531 | ENA

Sphingomonas guangdongensis strain:CGMCC 1.12672 | isolate:CGMCC 1.12672

Project description:Sphingomonas guangdongensis CGMCC 1.12672 genome sequencing

| PRJNA370099 | ENA

Geopseudomonas guangdongensis strain:CCTCC 2012022 | isolate:CCTCC 2012022

Project description:Pseudomonas guangdongensis CCTCC 2012022 genome sequencing

| PRJNA319686 | ENA

Direct comparison between a Burkholderia cenocepacia glycosylation mutant strain, and a glycosylation knockdown strain

Project description:To determine whether CRISPR interference can be used to recapitulate a glycosylation null mutant strain in Burkholderia cenocepacia via data independent acquisition mass spectrometry

2023-03-20 | PXD037550 | Pride

Genomic features and virulence characteristics of a rare Burkholderia thailandensis strain causing human infection

Project description:Introduction. Burkholderia thailandensis is a clinically rare opportunistic pathogen in the genus Burkholderia, and the genomic features and virulence characteristics of B. thailandensis strains that cause human infection remain unclear.Gap Statement. B. thailandensis strains with different virulence induce different host innate immune responses in vitro.Aim. This work aimed to understand the sequence diversity, phylogenetic relationship, and virulence of B. thailandensis BPM causing human infection.Methodology. The comparative molecular and genomic analyses, and mouse infection studies were applied to analyse the virulence and genomic features of B. thailandensis BPM originating from China.Results. The whole genome sequence analysis showed that the genomes of BPM and other avirulent B. thailandensis strains were broadly similar, comprising two highly syntenic chromosomes with comparable numbers of coding regions (CDs), protein family distributions, and horizontally acquired genomic islands. By examining species-specific genomic regions, we obtained molecular explanations for previously known differences in virulence and discovered the potential specific virulence-associated genes of BPM, which likely work together to confer the virulence of BPM. Significantly reduced LD50 and survival rates during mouse infection experiments were found in BPM compared to the avirulent B. thailandensis E264 (BtE264).Conclusion. Taken together, the results of this study provide basic information on the genomic features and virulence characteristics of the virulent B. thailandensis strain BPM, which is helpful for understanding its evolution as it relates to pathogenesis and environmental adaptability.

2021-02-15 | GSE147369 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data